Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01733 ATGAGAGAGGAGCAGAACGACACCGTTTTAGCAGCCACAAACGACGACGTCCCATCCGGCGTCGTTTTGTTCGGGAAATACGAGCTGCGGAGTTTACTCGGTGTAGGCGCGTTCGCCAAGGTTTACCACGCCACGCGCGTGGACACGCGCGAGAGCGTGGCGGTGAAGGCCGTGAAAAAAACAAAGGTCCTCAACGGCGGCTTCGCCGCCAACGTGGAGCGCGAGATCTCCATCATGCGCCGCCTCCACCACCGCAACATCATCAACCTCTTCGAAGTCCTCGCCACCAAGACCAAAATCTACTTCATAATGGAGTTCGCCGCCGGCGGCGAACTCTTCCACGAGGTCGCCGGAAAAGGACGATTCACGGAGGAAGGCGCCAGGTTCTACTTCCGGCAACTCATCTCCGCCGTGAAACACTGCCACGCCCGCGGCGTCTTCCACCGCGACCTGAAGCTCGATAACCTCCTAGTCGACGAAAACGGAAACTTAAAAGTCTCGGATTTCGGGTTAAGCGCGGTTTCGGGTCAGATCCGACCCGACGGTTTATTGCACACCGTTTGCGGGACCCCTACCCACGTGGCACCCGAGATTCTGGCGAAGCGAGGCTACGATGGCGCCAAGGTGGATCTGTGGTCATGCGGCGTCGTTTTGTTCACTCTCACCGCTGGTTATTTACCCTTCAATGATTACAATATTACCGTATTGTATAGAAAGATTTACCGCGGTCAATTCCGTTTCCCCAAGTGGATGTCCCTTGATCTGAGATTCCTCTTATCACGCCTTCTCGACACGAATCCCGAGACGCGGATCACCGTTGATGAGATCTATAATGACACGTGGTTCAACGCGGGTGAGTTCCGGCCCGACCGGGTTTTGCTCAAGGAGTGtaataataacaataataataaATTTGGATGCGAAGACGGTCGAACCGGGTTGGAGTCGCTGAACGCGTTTGACTTGATTTCGTTTTCCACCGGGTTGGACATGTCGGGTTTGTTTGAGGATCCGATCCGATCGGACTCGGTGGAGCGGGTTGTGTCTGCGGCGGCGCCGGAGCGCGTCATGGAGAGggtggaggcggtggcggcggaggggagggtggtggtgAGGAGGGAAGGGAAGGGTGGCGGAGCCAAGTTGGAAGGGCAGGATGGTAATTTGATTGGCGCTGTCGCGGTTTACCGGTTAACGGATGACCTGGTGGTGGTTGAAATGAAGAGGAGTGAGAAGGGAGGGGAATGTGGTGCGCAGTTTTGGAAAGAAAAATTGCGGCCTCTGCTTGTTGAATTCGCGGCTGAACGGGAAGCGCCGGTGTCCCGGTGA 1329 0.538 MREEQNDTVLAATNDDVPSGVVLFGKYELRSLLGVGAFAKVYHATRVDTRESVAVKAVKKTKVLNGGFAANVEREISIMRRLHHRNIINLFEVLATKTKIYFIMEFAAGGELFHEVAGKGRFTEEGARFYFRQLISAVKHCHARGVFHRDLKLDNLLVDENGNLKVSDFGLSAVSGQIRPDGLLHTVCGTPTHVAPEILAKRGYDGAKVDLWSCGVVLFTLTAGYLPFNDYNITVLYRKIYRGQFRFPKWMSLDLRFLLSRLLDTNPETRITVDEIYNDTWFNAGEFRPDRVLLKECNNNNNNKFGCEDGRTGLESLNAFDLISFSTGLDMSGLFEDPIRSDSVERVVSAAAPERVMERVEAVAAEGRVVVRREGKGGGAKLEGQDGNLIGAVAVYRLTDDLVVVEMKRSEKGGECGAQFWKEKLRPLLVEFAAEREAPVSR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01733 442 SMART serkin_6 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01733 442 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01733 442 Pfam NAF domain 315 372 IPR004041 GO:0007165
Cca07g01733 442 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 8 440 - -
Cca07g01733 442 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Cca07g01733 442 PANTHER - 8 440 - -
Cca07g01733 442 Gene3D Transferase(Phosphotransferase) domain 1 21 313 - -
Cca07g01733 442 Gene3D Kinase associated domain 1, KA1 314 433 - -
Cca07g01733 442 CDD CIPK_C 318 429 - -
Cca07g01733 442 ProSitePatterns Protein kinases ATP-binding region signature. 33 60 IPR017441 GO:0005524
Cca07g01733 442 SUPERFAMILY Protein kinase-like (PK-like) 23 287 IPR011009 -
Cca07g01733 442 ProSiteProfiles Protein kinase domain profile. 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01733 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01733 Cca-Chr7 43502724 43504468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01733 23 430 CBL-interacting serine-threonine protein kinases AT2G30360 55.718 2.32e-158 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca07g01733 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01733 - K12761 gmx:100788245 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01733 07 43502724 43504468 Cca07g01733 07 43502724 43504468 ECH