Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01730 ATGACCAAAACGACTGTACATCTGAGGTTGGATGTAGACCTCCACTATATGGCCTTGAAACAGCGCCTCCTTCAGCCACGGCAGCGCCGCCTCGCCATTGCCGGACCGGCCCATCGTAGAGCGAACTCGCCACCAGGATCTCCATCATCGCATGACTGTTCAGGAAAGCGCGCGTTGATAAAAAGCGCGTGCAGCTCCACATTGTACCCGGTTTGCGTCTTCGCCGTCGCCTCAGAAAGCAACGTGACGCACAAAGTGAGAAGCCACCGTGACGTCATGCAGCTCTCCCTCAACATCACCACGCGTGCCGGGGAGCACAACTACTTCACCGTGAATAGGCTTCTGGCCAAACACGCCCTTACCAAACGCGAAAAAACCGCTCTCCACGATTGCCTGGAGACCATAGACGAAACCGTGGACGAACTGAAACAAGCGGAAAAAGACCTGCAACTGTACCCCAACAAGAAAAGCCTCTACCAACACGCCGACGACCTGAAGACCCTTATCAGCGCCGCCATAATGAACTAG 528 0.5511 MTKTTVHLRLDVDLHYMALKQRLLQPRQRRLAIAGPAHRRANSPPGSPSSHDCSGKRALIKSACSSTLYPVCVFAVASESNVTHKVRSHRDVMQLSLNITTRAGEHNYFTVNRLLAKHALTKREKTALHDCLETIDETVDELKQAEKDLQLYPNKKSLYQHADDLKTLISAAIMN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01730 175 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 175 IPR006501 GO:0004857
Cca07g01730 175 CDD PMEI-like_3 62 173 - -
Cca07g01730 175 Coils Coil 128 148 - -
Cca07g01730 175 PANTHER PECTINESTERASE 54 175 - -
Cca07g01730 175 PANTHER PECTINESTERASE 54 175 - -
Cca07g01730 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 175 IPR035513 -
Cca07g01730 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 175 IPR035513 -
Cca07g01730 175 Pfam Plant invertase/pectin methylesterase inhibitor 59 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01730 Cca-Chr7 43461792 43464307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01730 47 175 Carbohydrate Esterase AT3G14310 56.489 1.31e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01730 K01051 - gmx:100776623 183.341