Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01719 ATGACCGAAGACCCATTTTACAGGGATGTGATGCATCTGTACCTCCCCCTCCCCCCACACCTTGGCGGCCACCACTACTGTTATAGTTTCACAGGCGAGAAAACAGCTTCTCAAAACGCTAATTCATTGAGAGGTTTTGATGTTATAGACAATATCAAATCTCAGCTAGAAACCTCATGCCCTGGTGTAGTCTCTTGCGCCGACATCATAGCCATTGTTGCACCAGATTCTGTTGTTGCTTTGGTTTAG 249 0.4618 MTEDPFYRDVMHLYLPLPPHLGGHHYCYSFTGEKTASQNANSLRGFDVIDNIKSQLETSCPGVVSCADIIAIVAPDSVVALV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01719 82 Pfam Peroxidase 30 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01719 82 Gene3D - 25 82 - -
Cca07g01719 82 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01719 82 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01719 82 PANTHER PEROXIDASE 29 81 - -
Cca07g01719 82 ProSiteProfiles Plant heme peroxidase family profile. 29 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01719 82 PANTHER PEROXIDASE 72-RELATED 29 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01719 82 SUPERFAMILY Heme-dependent peroxidases 29 80 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01719 Cca-Chr7 43237528 43238374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01719 29 81 Peroxidase AT5G05340 73.585 4.52e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01719 K00430 - csin:114318212 89.7373