Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01717 ATGATACGTTTCTTCTTACTCTTTTGCCTTGTTGGGGTAGTCTCAGCACAGTTATCATCTACCTTTTATGCCAAAACGTGCCCTAATGCGCTTTCAACCATTAAAGCACAAGTAGTGTCTGCTGTCAACAACGAGCCTCGCATGGGAGCTTCCCTGCTACGTCTTCATTTCCATGATTGCTTTGTTCAAGCAATACTATTGGATGATACATCAAGTTTCACAGGTGAAAAGACAGCGGGTCCTAATGCTAATTCCATTAGAGGCTTTGATGTAATTGACACCATAAAGTCTAAAGTAGAGAGCTTATGTCCTGGTGTTGTCTCTTGTGCTGATATTCTCGCTGTAGCAGCAAGAGACTCGGTTGTTGCTCTTGGTGGACAAAGTTGGACTGTGCAATTAGGTAGAAGAGACTCAACCACTGCAAGTTTGAGTTCTGCTAACTCAGACTTGCCTGCTCCTACTTCAAGTTTAAGTTCCCTAATCTCTTCTTTCTCCAACAAAGGTTTTACAACTAAAGAACTGGTTGCTCTTTCAGGTAGATCCCACACAATTGGGCAAGCGAAGTGTTCAAGCTTCAGAGCAAGGATTTACAATGACACCAACATAGATTCCTCTTTTGCAACATCATTGCAAGCAAATTGTCCTAGCACAGGTGGTGACAACAATTTGTCCCCTCTTGACACCACCAGCTCAACCACCTTTGACAATGCTTACTTCAAGAATTTGAAGAGCCAAAAGGGTCTTTTGCACTCAGATCAAGAGCTTTTCAATGGAGGATCCACTGACTCTCAAGTAAATGCTTATAGCAGTAATCCTGCAAGTTTCAAAACTGATTTTGCCAATGCAATGATTAAAATGGGGAACCTTAGTCCACTCACTGGCTCTAGTGGCCAGATCAGAACCAATTGTAGGAAGACCAACTAA 924 0.4242 MIRFFLLFCLVGVVSAQLSSTFYAKTCPNALSTIKAQVVSAVNNEPRMGASLLRLHFHDCFVQAILLDDTSSFTGEKTAGPNANSIRGFDVIDTIKSKVESLCPGVVSCADILAVAARDSVVALGGQSWTVQLGRRDSTTASLSSANSDLPAPTSSLSSLISSFSNKGFTTKELVALSGRSHTIGQAKCSSFRARIYNDTNIDSSFATSLQANCPSTGGDNNLSPLDTTSSTTFDNAYFKNLKSQKGLLHSDQELFNGGSTDSQVNAYSSNPASFKTDFANAMIKMGNLSPLTGSSGQIRTNCRKTN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01717 307 ProSiteProfiles Plant heme peroxidase family profile. 17 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 Gene3D Peroxidase, domain 2 151 286 - -
Cca07g01717 307 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PANTHER PEROXIDASE 11 307 - -
Cca07g01717 307 Pfam Peroxidase 35 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 SUPERFAMILY Heme-dependent peroxidases 17 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 Gene3D - 21 304 - -
Cca07g01717 307 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
Cca07g01717 307 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 281 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 PANTHER PEROXIDASE 72-RELATED 11 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca07g01717 307 CDD secretory_peroxidase 17 306 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01717 Cca-Chr7 43208602 43211664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01717 13 307 Peroxidase AT5G05340 66.777 1.35e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01717 K00430 - gmx:100815142 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01717 07 43208602 43211664 Cca07g01717 07 43208602 43211664 ECH
Cca07g01717 07 43208602 43211664 Cca05g01339 05 31419607 31423938 ECH
Cca07g01717 07 43208602 43211664 Cca01g00595 01 7523298 7527958 ECH
Cca07g01717 07 43208602 43211664 Cca01g01995 01 46624022 46628284 PCT