Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01712 ATGGGGATTAGgcactggtaCGAGTCTTTCCATGCGGACAAAGCCTCCATAATCCACACCTACCAAACAGTCTTTCACGGATTCTCAGCAAGCCTCTCACATGCCGAGGCACACAAGCTGCAATCACTCTCCCACGTCATAACTCTCATACCCGAGCAGCTGCGCCACCTCCACACCACGCGCTCCCCTCACTTCCTCGACCTCAACACTGTTGACACTGCTGGCTTACTCAAGGAGACTAACTTCGGCTCCGATATTGTCATTGGAGTCATTGACACCGACATCTCCCCCGAGAGCCAGAGCTTCAACGACCGCGATCTCGGCCTCCCTCCCCCAACTGGAAGGGACACCACCAACAGCAAAATGAACAGCACCCTCGAGTATCACTCCCCTAGAGACTCCGACAGCCACAACACCCACACTACCTCCATTGCCACTGAAAGGTACGTCTTCCCGGCCTCCACCATGGGCTACGCCAAAGGAATGGGCGTCGGGATGGCTCCCAAGGCTCGCCTTGTCGTCTACAAGGTCTGTTGGAACGCTGGCTACTATGACTCCGACATCCTAGCCACATTCGACGCTGCTGTGGCTGATGTCGTGGACGTGATCTCCCTCAACGTGCGGGGCGTGGTGGTGCCCTACCACCTGGACATCATCGTCGTGGGGGCCTTTGGAGCCAACGAGGCTAGCATCTTCATCTCCACCTCCGCTGGGAACGACGGCCCTTGTTAG 732 0.5642 MGIRHWYESFHADKASIIHTYQTVFHGFSASLSHAEAHKLQSLSHVITLIPEQLRHLHTTRSPHFLDLNTVDTAGLLKETNFGSDIVIGVIDTDISPESQSFNDRDLGLPPPTGRDTTNSKMNSTLEYHSPRDSDSHNTHTTSIATERYVFPASTMGYAKGMGVGMAPKARLVVYKVCWNAGYYDSDILATFDAAVADVVDVISLNVRGVVVPYHLDIIVVGAFGANEASIFISTSAGNDGPC 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01712 243 MobiDBLite consensus disorder prediction 113 127 - -
Cca07g01712 243 ProSiteProfiles Serine proteases, subtilase domain profile. 62 243 - -
Cca07g01712 243 MobiDBLite consensus disorder prediction 99 140 - -
Cca07g01712 243 Pfam Subtilase family 83 241 IPR000209 GO:0006508|GO:0008236
Cca07g01712 243 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 58 IPR037045 -
Cca07g01712 243 Gene3D Peptidase S8/S53 domain 85 242 IPR036852 GO:0004252|GO:0006508
Cca07g01712 243 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 114 242 - -
Cca07g01712 243 SUPERFAMILY Subtilisin-like 57 242 IPR036852 GO:0004252|GO:0006508
Cca07g01712 243 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 13 112 - -
Cca07g01712 243 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 114 242 - -
Cca07g01712 243 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 13 112 - -
Cca07g01712 243 Pfam Peptidase inhibitor I9 11 58 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01712 Cca-Chr7 43097719 43098926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01712 5 242 Subtilisin-like Serine Gene Family AT3G14240 58.148 6.11e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01712 - - gmx:100813247 352.058