Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01693 ATGGCAGTGACCTTAAAAGGTTGTTACACCGTGAAGCCTACGGAGAAAACATGGTGCGGACGCTTAGCTTTATCCGAATTGGATCAAACAGAACAAGTATCCCACGTTCCCAAAATCTACTTCTACCACCCCCCAGAAAACTGCAAGTACCCCACCATTGCTTCCACCTTGAGAGACTCACTGAGCCGAGTCCTGGTGCCGTTTTATCCCCTAGCCGGTCGTTTACACTGGATAAACAACGGTCGTTTAGAGCTCCATTGCAACGCCTCGGGGGTTTCCTTCATCGAAGCCGAATCCTCATCGAGTTTACAACATCTCAGTGACGACTTTAACTTGTACCGCCTCCTTGCCCCCACCGTGGACTACACGCTCCCAATTCACCAAAATCCGTTGCTTCTGATTCAGCTAACGAGGTTCTCCTGCGGCGGCATCAGCATCGGCCTCACGATTTCACACGTGGTGGTGGACGGACCCAGCGCGTCGCACTTCATTTGCGATACAAAACTAGATGAACATAGAATGGAATACAACCCCAACACAATTAAAATCAATATCAGACCCCATTACTTCACCACGTATGATTTTCCTTCCAAAAGGTCTCATGCAAATCACACAGCAGCTCTATTTGAGCACCAAGGCCAGCACAACATAGTCTTACTGAATCATGATTTTTAA 675 0.48 MAVTLKGCYTVKPTEKTWCGRLALSELDQTEQVSHVPKIYFYHPPENCKYPTIASTLRDSLSRVLVPFYPLAGRLHWINNGRLELHCNASGVSFIEAESSSSLQHLSDDFNLYRLLAPTVDYTLPIHQNPLLLIQLTRFSCGGISIGLTISHVVVDGPSASHFICDTKLDEHRMEYNPNTIKINIRPHYFTTYDFPSKRSHANHTAALFEHQGQHNIVLLNHDF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01693 224 Gene3D - 1 167 IPR023213 -
Cca07g01693 224 SUPERFAMILY CoA-dependent acyltransferases 55 165 - -
Cca07g01693 224 Pfam Transferase family 1 166 - -
Cca07g01693 224 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 165 - -
Cca07g01693 224 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01693 Cca-Chr7 42545789 42552159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01693 1 164 Monolignol Biosynthesis Gene Families AT5G48930 37.725 3.09e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01693 K13065 - ccaj:109814883 343.584