Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01659 ATGCGTGTCCTAGCGGCAAAACAGCACGAGCCGTTTCCCCCCGAAGAAGTGTCTCTGGAAGCATCATCTTCTTCTGCAAAAGCTTCAGCGACATTGTTGAAACTGTGCGCGCAAGGAACCCTAAATCGTTTAAGAAGCCACACAAGTAAAGCCATTGGTGCCATATTGTCAGCAACGAACTCAGTTTGTACATTGCAGGTTCTGAATCAAGATGAAACTCCATTCCTTTACAACATTGTATTTGGGGAGGGAGTAGTAAATGATGCTACATCTATTGTTCTTTTCAATTCGTACTGGCCTTGGCATACTAGTTGGCCTTTTGAGTGCTTATATTATAAAACACTTTACCTTGGAAGGCATTCTACTAATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTATCATATATCATTGTTGAGGCCAGAATTTGA 435 0.4138 MRVLAAKQHEPFPPEEVSLEASSSSAKASATLLKLCAQGTLNRLRSHTSKAIGAILSATNSVCTLQVLNQDETPFLYNIVFGEGVVNDATSIVLFNSYWPWHTSWPFECLYYKTLYLGRHSTNREVALMMLMAYLSYIIVEARI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01659 144 PANTHER SODIUM/HYDROGEN EXCHANGER 112 141 - -
Cca07g01659 144 Gene3D - 45 97 - -
Cca07g01659 144 PANTHER SODIUM/HYDROGEN EXCHANGER 42 97 - -
Cca07g01659 144 Pfam Sodium/hydrogen exchanger family 41 97 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca07g01659 144 PANTHER SODIUM/HYDROGEN EXCHANGER 42 97 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cca07g01659 144 PANTHER SODIUM/HYDROGEN EXCHANGER 112 141 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01659 Cca-Chr7 42034076 42039862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01659 51 141 Antiporters AT3G05030 54.622 3.63e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01659 K14724 - twl:120009025 119.783