Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01619 ATGGATGCATCAGACATTGCTTTATTTGAGGCATTTCTCCAAGGGTGGATGGAGAGACAAAGAGACTACCTTGATGAGCTTATAACAGCTCAACGACACTATCATGAGCTGCAAGAGGATGAGATAAAGCAGTTGATCAACAGGGTCCTCAATCACTACGGGCAATACTTTGAAGAGAAATCAAAGATTGCCCAACAGGATATTATCCTTGTTTTCTCCCCACCATGGTTCAGTTCACTGGAAAAAGGCTTCTACTGGGTGGGGGGGTTCAAGCCTGGAATGTCCTTTCAGTTGGTGAACAGTGCTGTGCCGGACTTGTCAGAAACGCAAAAGGGAAGGCTGACTTATCTCAAGCAAGTAACCAAGGTGAAGGAGAGAGGTATCAATGATGACTTGGCCAAGCTTCATGAGGGTTGGGGAGCTCCACCGCTCCTGGAGATGGTCAGGAGCCATGGCAGGATGTGTGTCACCAACTCCTTCCACTTCAGAGCAGCGGATGGAACAGTTCCAAGCAGTTACAAAGAAAAGCTGGAGAAGATGGTGGCAAGTGCAGATGCTTTGAGGACCAACACAGCTTTGAAGGTTGTGCAGATACTGACACCTCCTCAGATTCTCGCTTTCTTGGTCGGTGTGGCTCAGTTTCAGATCAGGGTCAGGACTTTTGGCATGGACAAGGATGCCCAGGATGCAGGCAAAGTGTGA 702 0.4843 MDASDIALFEAFLQGWMERQRDYLDELITAQRHYHELQEDEIKQLINRVLNHYGQYFEEKSKIAQQDIILVFSPPWFSSLEKGFYWVGGFKPGMSFQLVNSAVPDLSETQKGRLTYLKQVTKVKERGINDDLAKLHEGWGAPPLLEMVRSHGRMCVTNSFHFRAADGTVPSSYKEKLEKMVASADALRTNTALKVVQILTPPQILAFLVGVAQFQIRVRTFGMDKDAQDAGKV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01619 233 ProSiteProfiles DOG1 domain profile. 6 228 IPR025422 GO:0006351|GO:0043565
Cca07g01619 233 PANTHER - 6 229 - -
Cca07g01619 233 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 6 229 - -
Cca07g01619 233 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01619 Cca-Chr7 41319185 41321210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01619 4 222 Calmodulin-binding Proteins AT1G22070 29.545 1.60e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01619 - - ccaj:109815415 466.848