Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01615 ATGGCTACACCAAGCAATGCAAAACCTGGTTGCTTCTATGACTTCTTTCACCTACTCTTTTGTGCTGAGAGTGGAAATAGTCCTCCAATAATGCACCCTTCTAACGACTTTACAGAACCACATGCAACAAATGTAGTGCACACAAACAAAGATGCAATAGCCAATCCAACTAAACCAGGAGTGGTGGCTAGGCTAATGGGGCTTGATTCACTTCCAAGTACCAACTTAGCACCAAGAGGAAACACAAACACCACAGATTCAGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTCAAGTTTGATACCAACCAAAACCATCACCACCAAGTGAAGACCTCAGCATCATTCAGAGAGGTTCCTGAATTGTTTCAGGACAAGAATCATGACCTAGTTGTGCTCTACTTGGACACTGAAGACCAACAAGTTGGAACCTTATTGAGAAAGCAAGAAATGGGGATGGGAGAATCAAGACAGAGAAAGAAGCAGGGGAGCAAGAACAACAACAAGGAGATTGTTGATGTGAAGGGAAAAAAATTTTGCAAGTTTGAGAACGAGCCTAGAGTGGTCCCTTCTAAGCATAGGTCAAAGGTTCAAAATCACAATGAAGCTCAAGTTTTGGCATCAGTTTCAGCATGTTCTAAGCATTGTAGTAATAGAAAAAAAGTTGGTTGTGACACTAAAGGGTTAAGATCAATCTCCACATCGCCAAGTAAGCAGAAGAAAGTGTTATCTGAACCAAAACGCACGAGAAAAACAAGAAAACAAGAGTCAAAAAAGAGGATAGAGACTGACTGTAGCTCACAGAATTTGGGTCCAATTTCAGTCATAGATGAGTATGACTACTCATTTCTTAGTGGACCTGATTTTCCAGATTACACAAACCCCTTAAAGTGGGAATGTTCAGAGCAATTGTTACTTGGTGATAAGAATGTTGGAGACAGAGCAAGCAAAGACAAAGGGTTTTCCTACCTTGACATTACCAGGAACACAGAGTATTTATCAGAATTAACTGTGAATCTTCGCAACTTAGTAGAAAATGATATAAGAGAATCAGATTTCACGGGAAAGCGCATGTGTGAGAGTGAAAGTTATAGGGAAACTTGTTTGGACTTCGCGATCGTGCCACCGCGTGACATTGTCGTGCCACCACGCACCGCCTCCGGCCGGCGTGCCACTAGCCCCACACGCAACCGACCAGAGAATCCGTCACTGTCAGCGTTCCAATTTAAAGCCACAAGCTTCCGCCAAACCTTTGGGTTTCTCGCATTGATCATAACCTGA 1290 0.4279 MATPSNAKPGCFYDFFHLLFCAESGNSPPIMHPSNDFTEPHATNVVHTNKDAIANPTKPGVVARLMGLDSLPSTNLAPRGNTNTTDSVPRSRSVNFVDYLLKFDTNQNHHHQVKTSASFREVPELFQDKNHDLVVLYLDTEDQQVGTLLRKQEMGMGESRQRKKQGSKNNNKEIVDVKGKKFCKFENEPRVVPSKHRSKVQNHNEAQVLASVSACSKHCSNRKKVGCDTKGLRSISTSPSKQKKVLSEPKRTRKTRKQESKKRIETDCSSQNLGPISVIDEYDYSFLSGPDFPDYTNPLKWECSEQLLLGDKNVGDRASKDKGFSYLDITRNTEYLSELTVNLRNLVENDIRESDFTGKRMCESESYRETCLDFAIVPPRDIVVPPRTASGRRATSPTRNRPENPSLSAFQFKATSFRQTFGFLALIIT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01615 429 MobiDBLite consensus disorder prediction 155 173 - -
Cca07g01615 429 PANTHER OS05G0128300 PROTEIN 1 374 - -
Cca07g01615 429 MobiDBLite consensus disorder prediction 391 406 - -
Cca07g01615 429 MobiDBLite consensus disorder prediction 385 406 - -
Cca07g01615 429 MobiDBLite consensus disorder prediction 154 173 - -
Cca07g01615 429 Pfam DUF761-associated sequence motif 59 75 IPR032795 -
Cca07g01615 429 MobiDBLite consensus disorder prediction 221 266 - -
Cca07g01615 429 PANTHER ALC-INTERACTING PROTEIN 1 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01615 Cca-Chr7 41264043 41269164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01615 1 144 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 28.889 2.36e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01615 - - gmx:100775965 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01615 07 41264043 41269164 Cca07g01615 07 41264043 41269164 ECH