Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01612 ATGGCTACACCAAGCAATGCAAAACCTGGTTGCTTCTATGACTTCTTTCACCTACTCTTTTGTGCTGAGAGTGGAAATAGTCCTCCAATAATGCACCCTTCTAACGACTTTACAGAACCACATGCAACAAATGTAGTGCACACAAACAAAGATGCAATAGCCAATCCAACTAAACCAGGAGTGGTGGCTAGGCTAATGGGGCTTGATTCACTTCCAAGTACCAACTTAGCACCAAGAGGAAACACAAACACCACAGATTCAGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTCAAGTTTGATACCAACCAAAACCATCACCACCAAGTGAAGACCTCAGCATCATTCAGAGAGGTTCCTGAATTGTTTCAGGACAAGAATCATGACCTAGTTGTGCTCTACTTGGACACTGAAGACCAACAAGTTGGAACCTTATTGAGAAAGCAAGAAATGGGGATGGGAGAATCAAGACAGAGAAAGAAGCAGGGGAGCAAGAACAACAACAAGGAGATTGTTGATGTGAAGGGAAAAAAATTTTGCAAGTTTGAGAACGAGCCTAGAGTGGTCCCTTCTAAGCATAGGTCAAAGGTTCAAAATCACAATGAAGCTCAAGTTTTGGCATCAGTTTCAGCATGTTCTAAGCATTGTAGTAATAGAAAAAAAGTTGGTTGTGACACTAAAGGGTTAAGATCAATCTCCACATCGCCAAGTAAGCAGAAGAAAGTGTTATCTGAACCAAAACGCACGAGAAAAACAAGAAAACAAGAGTCAAAAAAGAGGATAGAGACTGACTGTAGCTCACAGAATTTGGGTCCAATTTCAGTCATAGATGAGTATGACTACTCATTTCTTAGTGGACCTGATTTTCCAGATTACACAAACCCCTTAAAGTGGGAATGTTCAGAGCAATTGTTACTTGGTGATAAGAATGTTGGAGACAGAGCAAGCAAAGACAAAGGGTTTTCCTACCTTGACATTACCAGGAACACAGAGTATTTATCAGAATTAACTGTGAATCTTCGCAACTTAGTAGAAAATGATATAAGAGAATCAGATTTCACGGGAAAGCGCATGTGTGAGAGTGAAAGTTATAGGGAAACTTGTTTGGAGTATGAACATAAAATTTTTGACATTTTACTGCACGAGGTTGTCAATGAACTCCTGGAATAA 1179 0.4003 MATPSNAKPGCFYDFFHLLFCAESGNSPPIMHPSNDFTEPHATNVVHTNKDAIANPTKPGVVARLMGLDSLPSTNLAPRGNTNTTDSVPRSRSVNFVDYLLKFDTNQNHHHQVKTSASFREVPELFQDKNHDLVVLYLDTEDQQVGTLLRKQEMGMGESRQRKKQGSKNNNKEIVDVKGKKFCKFENEPRVVPSKHRSKVQNHNEAQVLASVSACSKHCSNRKKVGCDTKGLRSISTSPSKQKKVLSEPKRTRKTRKQESKKRIETDCSSQNLGPISVIDEYDYSFLSGPDFPDYTNPLKWECSEQLLLGDKNVGDRASKDKGFSYLDITRNTEYLSELTVNLRNLVENDIRESDFTGKRMCESESYRETCLEYEHKIFDILLHEVVNELLE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01612 392 PANTHER OS05G0128300 PROTEIN 1 391 - -
Cca07g01612 392 Pfam DUF761-associated sequence motif 59 75 IPR032795 -
Cca07g01612 392 MobiDBLite consensus disorder prediction 154 173 - -
Cca07g01612 392 MobiDBLite consensus disorder prediction 221 266 - -
Cca07g01612 392 PANTHER ALC-INTERACTING PROTEIN 1 1 391 - -
Cca07g01612 392 MobiDBLite consensus disorder prediction 155 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01612 Cca-Chr7 41229871 41231479 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01612 1 390 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 24.612 7.40e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01612 - - gmx:100775965 519.235