Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01585 ATGGCATCTCCACAAGTGGCAAATGGGAACGGTTCATTGAGCTTGAAGAAGCCAAGTGAGACAAAAGGCAAGACCATCACTTGCAAAGCTGCTGTGGCATATGGTCCCGGAGAGCCCTTCGTGGTGGAAAACATTCTTGTTCATCCTCCTCAGAAAATGGAAGTCCGAATTAAGATCTTGTACACTTCCATTTGTCACACTGATCTTACCGTTTGGCAAGGCCAGAATGAGTCTCAGCGAGCTTTCCCTCGGATTTTTGGCCATGAAGCATCCGGGATTGTGGAGAGTGTAGGAGAAGGTGTGAGTGAAGTGAAGGAAGGGGACATTGTGGTGGCAATATTCAATGGGGAGTGTGGAGAGTGTGTCTATTGCAAGTGTGAGAAGAGCAACATGTGTGAGAGGTTTGGGGTGAACCCCATGAAGAAGGTGATGGAAGGAGATGGCACGTGCAGGTTCTCAACCATTGATGGCAAACCCATCTTCCATTTCTTGAACACTTCAACTTTCTCAGAGTACACAGTGTTGGATTCAGCCTGCGTGGTGAAGCTTGACCATGGTCATAGTCTCAGCCTCAAAAATCTTACCTTACTCAGTTGTGGTGTCTCCACAGGAGTTGGAGCAGCTTGGAATACAGCTAATGTGCATGCTGGTTCATTTGTAGCTATTTTTGGTTTAGGAGCTGTTGGACTTGCAGTTGCTGAAGGGGCAAGAGCCAGAGGTGCATCCAAAATAATAGGTGTGGACATCAACCCAGACAAATTCATCAAAGCCCAAGCTATGGGAGTTACACACTTCATAAACCCAAAGGATGAAGAGAAGCCAGTGTACGAGAGAATCAGTGAATTGACTGATGGAGGTGTACACTACAGTTTTGAATGTACAGGAAATGTGAACGTTCTAAGGGATTCCTTCTTGTCTGCTCATAAGGGTTGGGGATTGACTGTAGTATTGGGAATTCATTCATCACCAAAGTTGCTTCCCATCCACCCAATGGAGCTCTTTGATGGTCGCCAAATTGTAGGATCAGTATTTGGAGGTTTCAAAGGGAAAAGCCACTTGCCTCATTTTGCCACACAATGTGGACATGGAGTGGTGAAGCTGGATAATTTCATCACTCACGAGCTACCATTTGAAGAGATAAACAAAGCCTTCGATCTTTTGATCGCTGGGAAGTCGCTGAGATGTCTTTTGCACTTCTAA 1200 0.4575 MASPQVANGNGSLSLKKPSETKGKTITCKAAVAYGPGEPFVVENILVHPPQKMEVRIKILYTSICHTDLTVWQGQNESQRAFPRIFGHEASGIVESVGEGVSEVKEGDIVVAIFNGECGECVYCKCEKSNMCERFGVNPMKKVMEGDGTCRFSTIDGKPIFHFLNTSTFSEYTVLDSACVVKLDHGHSLSLKNLTLLSCGVSTGVGAAWNTANVHAGSFVAIFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTHFINPKDEEKPVYERISELTDGGVHYSFECTGNVNVLRDSFLSAHKGWGLTVVLGIHSSPKLLPIHPMELFDGRQIVGSVFGGFKGKSHLPHFATQCGHGVVKLDNFITHELPFEEINKAFDLLIAGKSLRCLLHF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01585 399 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 21 398 - -
Cca07g01585 399 SUPERFAMILY GroES-like 349 399 IPR011032 -
Cca07g01585 399 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 87 101 IPR002328 GO:0008270|GO:0016491
Cca07g01585 399 Pfam Alcohol dehydrogenase GroES-like domain 54 156 IPR013154 -
Cca07g01585 399 PANTHER ALCOHOL DEHYDROGENASE 21 398 - -
Cca07g01585 399 SUPERFAMILY GroES-like 21 223 IPR011032 -
Cca07g01585 399 Pfam Zinc-binding dehydrogenase 227 346 IPR013149 -
Cca07g01585 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 189 358 IPR036291 -
Cca07g01585 399 Gene3D - 31 394 - -
Cca07g01585 399 Gene3D - 204 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01585 Cca-Chr7 40734021 40744321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01585 54 388 Monolignol Biosynthesis Gene Families AT2G21890 26.496 1.37e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01585 K00001 - gmx:100815166 667.537