Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01563 ATGGGAACCTCTCTTCTTCGCTCCCACGATTGTCTTCAAGGCCCCGACGCAATGCCCCTCTATTCATCTTCCATTATATCACAAAGAAACCCTAACCCTAGCCCCAATCCTTCTCACGCTCGCCGGCGGAAGGTCTACGACGGCGATCGCTCCGGCATGGTGGTGAAGGGCCCCGGCGCGAACCTCGTCATGGGCCAAGTCAAGATCCTCAAGAGAGGCGAGAAGTTAAGCCCCAGCGCGAACCTCACCCTACGTAACCCTAACCTCCTCTTCTCGGTCCATTACGAGAGCCATTTCTTGTGTTTTATTAGAGAGGCAACCAATAAATTAAATGATGTTAAATCAATGAAGGGGACAACATACAGGATGGCTCCTGAGGTTGTAAAAGGAAAAAACCAAGCTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAAATGTTAACAGAGCGTGGCGTAAGTTTCAGGGAGGATGATGGTGATATTCGTAGGCAGCCATTGGAGCTTATTGGTGGTGATTTGGATGGAGTGAAGAAAGAGAGACAAGCACTTCGGTCCAAAATCAAGCAGATTGATGATGTACTCAAAACCATTGACAAGGATATCCAGACTCTACAGGATGAACTGGCAGTTGTTTCTCAGAAGAGGGACAAATCATTTGAGAGCATGCAGCAGCTCAGAAAATAG 699 0.4835 MGTSLLRSHDCLQGPDAMPLYSSSIISQRNPNPSPNPSHARRRKVYDGDRSGMVVKGPGANLVMGQVKILKRGEKLSPSANLTLRNPNLLFSVHYESHFLCFIREATNKLNDVKSMKGTTYRMAPEVVKGKNQAYGLPADMWSLGCTVLEMLTERGVSFREDDGDIRRQPLELIGGDLDGVKKERQALRSKIKQIDDVLKTIDKDIQTLQDELAVVSQKRDKSFESMQQLRK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01563 232 Gene3D Transferase(Phosphotransferase) domain 1 95 231 - -
Cca07g01563 232 MobiDBLite consensus disorder prediction 23 37 - -
Cca07g01563 232 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01563 232 Coils Coil 178 219 - -
Cca07g01563 232 SUPERFAMILY Protein kinase-like (PK-like) 109 162 IPR011009 -
Cca07g01563 232 PANTHER SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE 1 110 - -
Cca07g01563 232 Pfam Protein kinase domain 110 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01563 232 MobiDBLite consensus disorder prediction 23 51 - -
Cca07g01563 232 PANTHER BNAA09G00520D PROTEIN 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01563 Cca-Chr7 40331874 40336023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01563 84 153 MAP Kinase Kinase Kinase AT4G08500 46.479 1.32e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Cca07g01563 Pkinase 1.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01563 - - ccaj:109788419 232.646