Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01540 ATGTCAAGAAAGAGCAAAAGGGTGTGCCTTAGTCCTGATGTCAACGACAAACCAACCATCTTTCTAAAACACGGAGTTGGTGGTGGCAACGACAACGGTGGTAGAGTTTCAAGAAAGAGGGAGAGGATCATCAGAGCATGTTCTTTTAGATTGCCTAGAGACACAAACATGACTCCTGTGAGGTTGCTTCTGCGGCTAGGAGCAAAGGTGGCAAGTGCTATAAGAAATGTTTCTGTGAGAAGGAGATCCTCTAGGAAGGTTTCTTCATCCACTTTGGTCAGGTCACGTTCATTATCAGACCTCACTGATTCACATCGAGCTGAAACTGTAGAGGATTGCATTGAGTTCTTACATTCCTCTTCATCTAGGGAGAGACCAAGTTGA 384 0.4479 MSRKSKRVCLSPDVNDKPTIFLKHGVGGGNDNGGRVSRKRERIIRACSFRLPRDTNMTPVRLLLRLGAKVASAIRNVSVRRRSSRKVSSSTLVRSRSLSDLTDSHRAETVEDCIEFLHSSSSRERPS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01540 127 PANTHER JOSEPHIN-LIKE PROTEIN 1 127 - -
Cca07g01540 127 PANTHER - 1 127 - -
Cca07g01540 127 MobiDBLite consensus disorder prediction 83 98 - -
Cca07g01540 127 MobiDBLite consensus disorder prediction 81 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01540 Cca-Chr7 39846649 39847424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01540 - - gmx:100804764 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01540 07 39846649 39847424 Cca07g01540 07 39846649 39847424 ECH
Cca07g01540 07 39846649 39847424 Cca01g01837 01 42905088 42905848 PCT