Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01527 ATGACAACATCACGTAGTTCACTCTCGAGCTCAGGATCTGCGTCCACGTCCAAGGCGGTGAAGCTCGTCGACAGCGAGAAGACCGTTGTGCTCTTGTCACCGGCGATTTTTCGCCACCTCGGCAACACAGCCGCATTCCTGGCGGACGTGCGGAGGATCTTGCCAGGCGTGGTGGTTTTTGTGGACGGTGAGGGCTGGGCAGAGGTAGCGACTGCGAAGGTGGCGTCGTTCCGGCGCGGCGTTGTGAGCAGCCTAGAGTACTACTCGATGATGTTGGAGTCGTTGGACGCTTCGATGGTGGTGGGAGGAGGGGAGTGGGTGAGGAGATTAGAGATGCTGTAG 342 0.5906 MTTSRSSLSSSGSASTSKAVKLVDSEKTVVLLSPAIFRHLGNTAAFLADVRRILPGVVVFVDGEGWAEVATAKVASFRRGVVSSLEYYSMMLESLDASMVVGGGEWVRRLEML 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01527 113 MobiDBLite consensus disorder prediction 1 20 - -
Cca07g01527 113 PANTHER SCARECROW-LIKE PROTEIN 15 21 112 - -
Cca07g01527 113 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 112 IPR005202 -
Cca07g01527 113 Pfam GRAS domain family 16 99 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01527 Cca-Chr7 39490733 39491074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01527 18 102 GRAS Transcription Factor Family AT4G36710 55.294 2.86e-25 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Cca07g01527 GRAS 1.9e-09 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01527 - - gmx:100807470 160.229