Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g01519 | ATGGAGGTGGAGGGTTCCGATAATTCTCATGGCAAGAACCGTAAAAGAGGGTTTTCAAGAAAACTTGATGTCGGTGAAAAAGTGGAGTTGAGGAGTTTAGAGATGGGTTTTGCGGGATCATGGCACCCTGCGACAGTTTTACAGTGCGAGAAGTTGAAGCGCCTCATCAGATATGAAAATGTTTTGGATAATAATGGTGAGGGTTATCTTGAGGAAGAAGTAACTGTTTCAAAAGCTTTGGATGGTGATACTGAAGACGTAAACTACTACGAGCGTGGGATCCTTAGGCCGGTGCCTCCTTTGGTTGATTTTGAGAAATCAGACCTTAGGTTTGGTCTTTGTGTTGATGTGAAATATGAGGAAGCTTGGTGGGAGGGTGTTATATTTGACCACAATGATGGAATGACGAAGAGGACTGTGTTTTTCCCTGATTTGGGTGATGAACTACAAGCTGAAATGCATCAGATGCGGATTACTCAGGACTGGGATGAAGTTACAGAGGAGTGGGGGCAGCGAGGGAAGTGGGTGTTTCTTGACTTGGTTGAGGAGCTGAAGGGGAAATTGTTTGTTGCAGTTTCAGCTCAGCAAATTTGGTATGATGTGCGCCTAAAAAGGGATTTTTTTGAGATGATTAGAGAATGGACATGTAATGTGGAGTACTTGTGGAAAAAAGTGGTGGTGGAGGTAGTTAATGACTACTTATCTGTTATGGTAAAAGAAGTTATCTCGACCTTAAACCTTCCAGGAAGTTTATTAAATGAAGCACCAGAGCTGGCTTCTGCTGAAGCTGTGGCTAGTGTTGGTTTAAACACGACCCTGCCTGATAAGGAAACTCATGTTAAACAGATCTTACCTGAGTTTCAAAAAGAATTTGGTCCCAATGGTGGTGCTTGTGAAGTAGTTTCAGGTGCTAACTGTTTTGAAGAAAGTACAAGTTCCGACTATTGGAAACCTGTGAATTTCTCTGAAGGTGAATTCTGCCCTGATGCTGTTAATGAATATCCACGGGCTTCCAAACATGCAAGGACATTTTGGTCGGAGAAATTGCAAAAACATCTTGTGTACCTTGGATGGAAAATTGAGAGGACAAAGAAACGTAACATTCAACGTTACAGGTATCATGTTCCTGATAAACTGGGCCATAAAGCTTATCTTTCACTCCTTGAAGTTTGTAGGGCTATAAAGAACAACCCCAATATGAACTCCTTGCAGTTCCAAAATGATCAGATTATAATGCAACATCCTACAGTTGACTGTCATCTTTCAGAGGTGCCTCTTAATCCATCAGAAAATATTCTAACTATGCCTCTTAATCCGTCAGAAAATATTCCAACTGTGCCATTTTCTCCTGTTGAAGATGAACCTGATTTTTGTCCTCAAGCTATCATGCAATATTATAACGCCCATGTATCCAATAAGAATCGGGTTGATAAAAGAAAATGGATACCGAAAGCAAAGAATCATCTGTTAGCAGAAGGATGGTTTTTTGACTATCCACCTCCAAATAATAAGAAAAGGGGAATAATATACATGTCTCCACAGAATCGGAAATTCCCAACACTCCATGCAGCATGCAGATTTTGTATCGAAGAAAACACTCCTAAATGGACTATGTTTGGCAATCAACCTGTAAATGTGTCAAGCATGAATGAGGCAAATGTTGATCAGCAATCCCAAATGCAACTACAAGACCCTGAGTTGCAGGCTATGGATGGTACTGCTGCTAGTAGGTCGAGTGTAAATCGAAAGCGGAAAAGGTTGAGGGATTCAAAGGCCAACATACCGAAGTGCCAAAGCAATGGATTGCCTCTACGGGTGTTAAGATCAAGGAAGAGGGTGCAAAAGGTGTCTGTCCCTTCTCTTTTACATCAAAAACCTTTAAATGTTATGTCTTGCTTGATAGACAGCAACATCATCTTACCAAGGTCGAAGGTTTACTATAAGGAAAAAAGCAGGTACCGTGAAGTCCCTACTTTGGGTGAAGGGAAAATAACTCACGATGGAATTAAGTGTAACTGTTGCATGAAGATATTCAGTTTTGTTGGCTTTGAAAATCATGTTGGTGGCAGTAGTACCTGCAGACCCTCTGCTAGTATTTTTTTGGAAGATGGTAGATCACTGTTAGATTGCCAGATAGAAATGATGCGAAGTCATAAGACGAAGGAAACTAGCGGAAAATCATTCAGTGATTTGTCTATAGTTGAGAATGACTACATTTGTTCTGTTTGCCACTATGGCGGTGAACTTATTTTATGCGATAAATGTCCATCTTCATTTCATAAGACGTGTCTCGGTTTGGAGGAAATCCCTGATGGTGACTGGTTTTGTCCATCTTGTCGCTGCGGGATTTGTGGCCAAAGGAAAATTGATGGAGATGAGGTTGGACATTTCCTAACTTGCATTCAGTGTGAACATAAATATCATGTTAGGTGCCTGAAAAATGGAGCTGTAGATATATCAAGATATCTTGGAAATTGGTTCTGTGGAAAAGACTGTGAAAAGATATATGAGGGCCTTCATAAATTATTAGGAAAACCAATTTCTGTGGGTGTGGACAAGCTAACTTGGACATTGGTGAAGTTTATCGACCCTGACCGTTGTGACAGTGGTAGTATTAAAAGTGACTTATTGGCAGAAAGTTACTGCAAACTCAATCTCGCTCTTTCGGTGATGCATGAGTGTTTTAAGCCTCTAAAGGAATCTTTCACTCGCAGAGATATTGTGGAAGATGTTATATTCAACAGATGGTCAGAGCTTAACCGATTAAGCTTCCAGGGTTTCTATACTGTGCTACTTGAGAGAAATGAAGAACTGATCAGTGTTGCAACTGTTAGGGTCTATGGGAAGAGGGTAGCAGAATTACCTCTTGTTGGTACCAGATTACAATATCGTCGACATGGAATGTGTCGCATTTTAATAAATGAGCTTGAAAAGAAACTCACACAACTAGGTGTGGAGAGACTTGTGTTGCCGGCTGTTCCTAGTGTGCTAGAAACATGGACAGGCTCTTTTGGATTTGCAAAGATGACTGATTTTGAGAGATCTCAATTTCTGGACTATACTTTCCTAGATTTTCAGGGTACCATCATGTGCCAGAAGCTGTTGACTAATATTCCATCTAGCGATTCAGTTTTGTTAATAGAGTCACAACTAAAATGTGGTGTATACCAAATAGAAGAGACTGATGAAGGAAGGGTAGTTGATCAACAAATGGAGGACGGCCGCAATCGTGGCTGTAGCGAGTGCGAAATGAGGACAGATCTCCTCCAACGGTTCTTTGACATTTCTTTGGCGGaccaaggagaacctgagggggagaatcaactcgatttcgctcgtgcttcatcttctgttcatcaaggtgatcatcaacatgaggatattggtgatgaggtttag | 3399 | 0.3969 | MEVEGSDNSHGKNRKRGFSRKLDVGEKVELRSLEMGFAGSWHPATVLQCEKLKRLIRYENVLDNNGEGYLEEEVTVSKALDGDTEDVNYYERGILRPVPPLVDFEKSDLRFGLCVDVKYEEAWWEGVIFDHNDGMTKRTVFFPDLGDELQAEMHQMRITQDWDEVTEEWGQRGKWVFLDLVEELKGKLFVAVSAQQIWYDVRLKRDFFEMIREWTCNVEYLWKKVVVEVVNDYLSVMVKEVISTLNLPGSLLNEAPELASAEAVASVGLNTTLPDKETHVKQILPEFQKEFGPNGGACEVVSGANCFEESTSSDYWKPVNFSEGEFCPDAVNEYPRASKHARTFWSEKLQKHLVYLGWKIERTKKRNIQRYRYHVPDKLGHKAYLSLLEVCRAIKNNPNMNSLQFQNDQIIMQHPTVDCHLSEVPLNPSENILTMPLNPSENIPTVPFSPVEDEPDFCPQAIMQYYNAHVSNKNRVDKRKWIPKAKNHLLAEGWFFDYPPPNNKKRGIIYMSPQNRKFPTLHAACRFCIEENTPKWTMFGNQPVNVSSMNEANVDQQSQMQLQDPELQAMDGTAASRSSVNRKRKRLRDSKANIPKCQSNGLPLRVLRSRKRVQKVSVPSLLHQKPLNVMSCLIDSNIILPRSKVYYKEKSRYREVPTLGEGKITHDGIKCNCCMKIFSFVGFENHVGGSSTCRPSASIFLEDGRSLLDCQIEMMRSHKTKETSGKSFSDLSIVENDYICSVCHYGGELILCDKCPSSFHKTCLGLEEIPDGDWFCPSCRCGICGQRKIDGDEVGHFLTCIQCEHKYHVRCLKNGAVDISRYLGNWFCGKDCEKIYEGLHKLLGKPISVGVDKLTWTLVKFIDPDRCDSGSIKSDLLAESYCKLNLALSVMHECFKPLKESFTRRDIVEDVIFNRWSELNRLSFQGFYTVLLERNEELISVATVRVYGKRVAELPLVGTRLQYRRHGMCRILINELEKKLTQLGVERLVLPAVPSVLETWTGSFGFAKMTDFERSQFLDYTFLDFQGTIMCQKLLTNIPSSDSVLLIESQLKCGVYQIEETDEGRVVDQQMEDGRNRGCSECEMRTDLLQRFFDISLADQGEPEGENQLDFARASSSVHQGDHQHEDIGDEV | 1132 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g01519 | 1132 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 909 | 1016 | IPR016181 | - | |
Cca07g01519 | 1132 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 874 | 1035 | IPR000182 | GO:0016407 | |
Cca07g01519 | 1132 | PANTHER | PHD ZINC FINGER PROTEIN | 329 | 1052 | - | - | |
Cca07g01519 | 1132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 732 | 781 | IPR013083 | - | |
Cca07g01519 | 1132 | PANTHER | PHD ZINC FINGER PROTEIN | 4 | 291 | - | - | |
Cca07g01519 | 1132 | Pfam | Tify domain binding domain | 662 | 714 | IPR032308 | - | |
Cca07g01519 | 1132 | PANTHER | AGENET DOMAIN-CONTAINING PROTEIN-RELATED | 329 | 1052 | - | - | |
Cca07g01519 | 1132 | Pfam | PHD-finger | 739 | 781 | IPR019787 | - | |
Cca07g01519 | 1132 | CDD | NAT_SF | 930 | 990 | - | - | |
Cca07g01519 | 1132 | Pfam | Agenet domain | 25 | 100 | IPR008395 | - | |
Cca07g01519 | 1132 | ProSiteProfiles | Zinc finger PHD-type profile. | 737 | 782 | IPR019787 | - | |
Cca07g01519 | 1132 | PANTHER | AGENET DOMAIN-CONTAINING PROTEIN-RELATED | 4 | 291 | - | - | |
Cca07g01519 | 1132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 782 | 835 | IPR013083 | - | |
Cca07g01519 | 1132 | CDD | PHD2_CHD_II | 740 | 779 | - | - | |
Cca07g01519 | 1132 | Gene3D | - | 891 | 1025 | - | - | |
Cca07g01519 | 1132 | SMART | agenet_At_2 | 20 | 103 | IPR014002 | - | |
Cca07g01519 | 1132 | SMART | agenet_At_2 | 107 | 164 | IPR014002 | - | |
Cca07g01519 | 1132 | MobiDBLite | consensus disorder prediction | 570 | 591 | - | - | |
Cca07g01519 | 1132 | SUPERFAMILY | FYVE/PHD zinc finger | 717 | 780 | IPR011011 | - | |
Cca07g01519 | 1132 | MobiDBLite | consensus disorder prediction | 1102 | 1132 | - | - | |
Cca07g01519 | 1132 | SMART | PHD_3 | 781 | 832 | IPR001965 | - | |
Cca07g01519 | 1132 | SMART | PHD_3 | 739 | 780 | IPR001965 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g01519 | Cca-Chr7 | 39348844 | 39359464 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g01519 | 31 | 983 | PHD Transcription Factor Family | AT5G58610 | 37.218 | 0.0 | 595 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Cca07g01519 | Agenet | 2.3e-14 | CL0049 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g01519 | - | - | ccaj:109815079 | 2194.85 |