Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01513 ATGAAGGTTCTGTCCATAAACCTTGGATTGGAAGAGGATTTTCTTCAAAAATCATTTGGAGGAGAAGATATTGGAGCGTGCCAGAGGGTGAATTTTTACCCTAAGTGTCCACGGCCAGAGTTGACATTGGGTTTGTCATCGCACTCAGATCCAGCAATAGGATTTGACGTTTTGAATATAAGACTTGATCCAAACTATTCAAACTTCTTACCAGGTTCAGGCTTTTCGTTGCCCTTTCCGAAGAAGCGCCACTCTCTTCTTCTTGAAAGCTcctcctccgccgccgccgctgtgccgcccgacgccccctccccgccgTGCGAGGTCAGGAATAATTACACCGAAGAGAACGTTAACCTGATTAAGGAAATCAAATCGAAGAGCGATTACTACGCTATTCTTGGATTAGAGAAAAACTCCTCCGTCGAAGAGATTCGAAAGGCTTATAGGAAACTCTCGCTCAAGGTTCATCCCGATAAGAACAAAGCTCCTGGCTCTGAAAACGCCTTCAAGAAGGTTTCCAAGGCTTTCAAGTGCTTGAGCGACGATGGTTCTAGAAGGATCTACGACCAGACCGGCACGCTCCACGAATTCGACAACTTCGAGGTCAACTCTTTCCGGCAGCGGAGAAGAAGAGCCACAACGACGACAACGACGCGGGATTTCTTCGACGAAGAGTTCGACCCCGACGAGATTTTCTGA 702 0.4259 MKVLSINLGLEEDFLQKSFGGEDIGACQRVNFYPKCPRPELTLGLSSHSDPAIGFDVLNIRLDPNYSNFLPGSGFSLPFPKKRHSLLLESSSSAAAAVPPDAPSPPCEVRNNYTEENVNLIKEIKSKSDYYAILGLEKNSSVEEIRKAYRKLSLKVHPDKNKAPGSENAFKKVSKAFKCLSDDGSRRIYDQTGTLHEFDNFEVNSFRQRRRRATTTTTTRDFFDEEFDPDEIF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01513 233 PANTHER CHAPERONE PROTEIN DNAJ 49 108 233 - -
Cca07g01513 233 PANTHER AT29763P-RELATED 108 233 - -
Cca07g01513 233 Pfam DnaJ domain 129 190 IPR001623 -
Cca07g01513 233 SUPERFAMILY Chaperone J-domain 125 206 IPR036869 -
Cca07g01513 233 PRINTS DnaJ domain signature 131 149 IPR001623 -
Cca07g01513 233 PRINTS DnaJ domain signature 149 164 IPR001623 -
Cca07g01513 233 PRINTS DnaJ domain signature 165 185 IPR001623 -
Cca07g01513 233 Gene3D DnaJ domain 125 232 IPR036869 -
Cca07g01513 233 Gene3D - 1 55 IPR027443 -
Cca07g01513 233 SMART dnaj_3 128 185 IPR001623 -
Cca07g01513 233 SUPERFAMILY Clavaminate synthase-like 1 51 - -
Cca07g01513 233 CDD DnaJ 129 182 IPR001623 -
Cca07g01513 233 ProSiteProfiles dnaJ domain profile. 129 193 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01513 Cca-Chr7 39194390 39198846 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01513 130 190 C2H2 Transcription Factor Family AT1G74250 43.284 7.63e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01513 K09518 - gmx:100820432 161.384