Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01486 ATGTTGTTGACATTGTTCTCAACGGCCGCCGCAGAGGGTGTTCCGGCGCCGTACAACTcgacggtggcgacgcggctggggcggcggcggATTCCGATACACACGACGTTCTACTGGAGCCACAAGGTGGACATACTGTTCCGGTGTTGGCCAGGGGACAGCGCGGGCATGTACGCGGTGGCGCTGCTGCTGGTGTTCGGCATGGCGGTGTTGGTGGAGTGGCTCTCGTTCACCAACATCGTGAAGCTCAAGCCTGGGGCCTCGAACGACGTCGTTGGGGGGCTCCTTAAGACGGGGCTATACGGCGTGCGTTCCGGGCTCTCTTACTTGGTGATGCTGGCTGTCATGTCGTTTAACGGAGGCGTGTTTGTCGCCGCAATTGGTGGCCACGTCATCGGTTTCTTGATTTTCGGGACGCGGGCTATTATTCGGAAGAAATCGGGTGGGTTGGATTCTTCCAAAGCGTAG 468 0.5363 MLLTLFSTAAAEGVPAPYNSTVATRLGRRRIPIHTTFYWSHKVDILFRCWPGDSAGMYAVALLLVFGMAVLVEWLSFTNIVKLKPGASNDVVGGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFVAAIGGHVIGFLIFGTRAIIRKKSGGLDSSKA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01486 155 Pfam Ctr copper transporter family 36 78 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca07g01486 155 Pfam Ctr copper transporter family 95 137 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca07g01486 155 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 13 145 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca07g01486 155 PANTHER COPPER TRANSPORTER 4 13 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01486 Cca-Chr7 38833125 38833850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01486 36 140 Inorganic Solute Cotransporters AT5G59030 49.524 1.92e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01486 K14686 - gmx:100803410 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01486 07 38833125 38833850 Cca07g01486 07 38833125 38833850 ECH