Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01481 ATGGACATGCCCGAAAGCCAAAACATGCCAAACATGTCTAATAATGTGACGAGGAATATGAACATGATGAGTTTCTATTGGGGCAAAGATGCAATAGTGCTTTTCGCAGGGTGGCCAGATCAAAGTGCTGGCATGTACTTCTTAGCCATATTGTTTGTGTTCATCCTAGCCATGACCACTGAGGTGTTAGCCAACCAGCCACTCATCAAGCCAAGGACTAGTCCCCTTGTGGGAGGGATGGTTCAAGCAAGTGTCCATTTGGTTCGTGTTGGCTTCACTTACTTGCTCATGCTTGCTGTCATGTCCTTCAACGGCGGAATCTTCATAGCTGCCGTCCTTGGCCACGCCTTCGGCTTCTTCATCGCCAAGTCTCGTACTCTTGCCGTCACCGATACGGAAAAAGACAAAGACTCTTCCGTCACAAACCATGTTTGA 435 0.4805 MDMPESQNMPNMSNNVTRNMNMMSFYWGKDAIVLFAGWPDQSAGMYFLAILFVFILAMTTEVLANQPLIKPRTSPLVGGMVQASVHLVRVGFTYLLMLAVMSFNGGIFIAAVLGHAFGFFIAKSRTLAVTDTEKDKDSSVTNHV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01481 144 PANTHER CTR FAMILY COPPER TRANSPORTER 2 138 - -
Cca07g01481 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 138 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca07g01481 144 Pfam Ctr copper transporter family 23 64 IPR007274 GO:0005375|GO:0016021|GO:0035434
Cca07g01481 144 Pfam Ctr copper transporter family 70 121 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01481 Cca-Chr7 38717259 38718352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01481 24 137 Inorganic Solute Cotransporters AT5G59030 44.444 4.00e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01481 K14686 - gmx:100527849 178.718