Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01477 ATGGCCACAAATCAGGAAGAGGTGTCACTTTTGGGAGTAACTGGAAGCCCATTTGTGTGCAGGGTTCAGATTGCTCTCAAGTTGAAGGACATTGAGTACAAATTTTTGGAAGAAAATTTGGGCAACAAGAGTGAGTTGCTCCTCAAATACAACCCAGTTCACAAGAAGGTTCCAGTGTTTGTTCACAATGAGAAGCCCATAGCAGAGTCTCTTGTGATCGTTGAATACATTGATGAGACATGGAACCAAAATCCCATCTTGCCTTCAGATCCTTACCAAAGGGCCTTGGCTCGTTTCTGGTCCAAATTCATAGATGACAAGGTTGTGAGTGCTGCATGGAAAGCTGTTTTCACGGTTGATGAGAAAGAGCGTGAGAAGAATAGTGAAGAATCATGGGAGGCACTGCAGTTTCTTGAGAATGAGATAAAGGACAAAAAGTTCCTTGGAGGAGAGGAAATAGGGTTGGTAGATATTGCTGCTGTTTTCATTGCCTTTTGGATCCCAATTTTCCAAGAAGTAGGAGGGTTGGAGTTGTTCACAAGTGACAAATTTCCCAAACTCTACAAATGGAGCCAAGAATTAATCAACCACTCTGTTGTGAAAGAAGTGCTTCCTCCTAGAGACCCACTTTTTGCCTACTTCAAAGCCCGCTATGAAAGCCTTAGTGCCTCAAAATAG 678 0.4292 MATNQEEVSLLGVTGSPFVCRVQIALKLKDIEYKFLEENLGNKSELLLKYNPVHKKVPVFVHNEKPIAESLVIVEYIDETWNQNPILPSDPYQRALARFWSKFIDDKVVSAAWKAVFTVDEKEREKNSEESWEALQFLENEIKDKKFLGGEEIGLVDIAAVFIAFWIPIFQEVGGLELFTSDKFPKLYKWSQELINHSVVKEVLPPRDPLFAYFKARYESLSASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01477 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 221 - -
Cca07g01477 225 CDD GST_N_Tau 8 81 - -
Cca07g01477 225 Gene3D - 90 225 - -
Cca07g01477 225 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Cca07g01477 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Cca07g01477 225 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Cca07g01477 225 SUPERFAMILY Thioredoxin-like 9 108 IPR036249 -
Cca07g01477 225 Pfam Glutathione S-transferase, C-terminal domain 105 196 IPR004046 -
Cca07g01477 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Cca07g01477 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Cca07g01477 225 Gene3D Glutaredoxin 1 89 - -
Cca07g01477 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Cca07g01477 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Cca07g01477 225 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01477 Cca-Chr7 38468283 38469874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01477 4 224 Glutathione S-transferase Gene Family AT3G09270 54.018 5.14e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01477 K00799 - gmx:100807613 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01477 07 38468283 38469874 Cca07g01477 07 38468283 38469874 ECH