Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01464 ATGGCTGAGGGCTTCGAGCATTACCATGTCCCACAACAAAGTAGAAGGGACAAGCTGAGAGTTTTTCCTCAGAGCCAACCTGGTTTCGTTGAATCCTCCACTACCCTTCACCCCACTTGTCCAACTTTGCCCTCTCTCTACGACCCTTCACTTATTCCCTCTGATTTGCTAGCTTGTGGCACCCCACAAGGCCACGCTACAAAGGAAGAAGGTTCCAATTTGATGATGGGGTTTGCGGAAGGAGGGGTTGTGAATGGTGACGCAATTCAGTTTATTAACAGTGGTAGCAGCAACAACCCTTTTCTCTACCACCTTCAGAACCTTAGGGAGTTTGGTGATAGCTACAATGATGGGAGTGAGATGATGGTGTTTAAGCCCGAGCCTTTGGCTTTGTCTTTGTCTTCTCACAGTAGCAACACTCACCACCCTTTGGAACTTAATCTTCAGCGATATGGGGGTGTTGTTTATGGCGATAAGggtggtggtggtggtggttgtgTAGTTCCGGGTTTGGTTGGCGGGAACTGTGAGGTTTTGAGGAATTCAGTTCCACTTGGACCCTTCACGGGTTATGCTTCGATATTGAAGGGATCGAGGTTCTTGAAGCCTGCACATCAATTATTGGAAGAGTTATGTGATGTTGGGGTTCGTGGGGTTTACGCTACCGAGAAGATTATTGCTCCTGATGCATCGTTGATGGAACCTACTCATGAGGGTTTAAGTGCTAGTGGAATTGGTGGGGATGATCCACTCGGAGAATATGGGAATGAGGGCAAGAAGAAGTGTAGATTATTAACCATGCTTGACGAGGTTTGCAGGAGGTACAGGCAGTATTACCAACAGATGCATGCAGTAATAACATCATTTGAGTATGTTGCTGGCCTTGGTAATGCAGCCCCATATGCAAGTTTGGCTATAAATGCCATGTCCAAACATTTTAGATGCTTGAAGAATGCTATTACTGACCAGCTGCAGTTCATCAACAAGGCTCCTTTTCAGATAAGCAACAGGAAGGATGAATCTCCAAGGTTTCACAACAGCGATAGGGGCACTTACAGCCAAAGGCCAGGGTTTCTTGAGCACCAACAACCAGTTTGGCGACCTCAACGAGGACTCCCCGAGCGTGCCGTTAGTGTTCTCAGGGCCTGGTTGTTTGAACACTTTCTTCACCCTTATCCAACTGATACCGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGCAACCAGGTGTCTAATTGGTTTATTAATGCAAGAGTGAGGCTTTGGAAACCCATGGTGGAAGAAATACACACGCTAGAATCACAGCAAGGTCAAAAACGGCCACATAGGGAAGAACAAAGTAGGAAAAACTTGAATGATCATTTACCTTCAGACAACTCTCTTGTTACCGAGAATCCATCTGCATGCATGGAAAAGTTTCATGATGATGGCCCTTACAAACACCCTAGGAATGAACTTGCAAATATTCAAGTGAGGAATAATCAGGAGCAACTGAATCAGAGTAACACAAGCAATCAGCTAGTGGGTGTTGGAGTGAGCAATAATGGTGTGTCTCTCACACTTGGACTTCACCAAAATCATGGTATTGGGTTGTCTGAGCCATTCAGCATGAGTGCAGCTCAGCGATTTGGTGTTGCCCTTCAGCATGAGGGCTATGCTATAAGTGGTTTTGAATCACATAATCGACATTTTGCAGGACAACTGTTGCATGATTTTGTAGGCTGA 1731 0.4495 MAEGFEHYHVPQQSRRDKLRVFPQSQPGFVESSTTLHPTCPTLPSLYDPSLIPSDLLACGTPQGHATKEEGSNLMMGFAEGGVVNGDAIQFINSGSSNNPFLYHLQNLREFGDSYNDGSEMMVFKPEPLALSLSSHSSNTHHPLELNLQRYGGVVYGDKGGGGGGCVVPGLVGGNCEVLRNSVPLGPFTGYASILKGSRFLKPAHQLLEELCDVGVRGVYATEKIIAPDASLMEPTHEGLSASGIGGDDPLGEYGNEGKKKCRLLTMLDEVCRRYRQYYQQMHAVITSFEYVAGLGNAAPYASLAINAMSKHFRCLKNAITDQLQFINKAPFQISNRKDESPRFHNSDRGTYSQRPGFLEHQQPVWRPQRGLPERAVSVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHTLESQQGQKRPHREEQSRKNLNDHLPSDNSLVTENPSACMEKFHDDGPYKHPRNELANIQVRNNQEQLNQSNTSNQLVGVGVSNNGVSLTLGLHQNHGIGLSEPFSMSAAQRFGVALQHEGYAISGFESHNRHFAGQLLHDFVG 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01464 576 ProSiteProfiles 'Homeobox' domain profile. 363 426 IPR001356 GO:0003677
Cca07g01464 576 Gene3D - 369 431 - -
Cca07g01464 576 CDD homeodomain 366 427 IPR001356 GO:0003677
Cca07g01464 576 Pfam Homeobox KN domain 383 422 IPR008422 GO:0003677|GO:0006355
Cca07g01464 576 MobiDBLite consensus disorder prediction 337 360 - -
Cca07g01464 576 MobiDBLite consensus disorder prediction 434 466 - -
Cca07g01464 576 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 84 557 - -
Cca07g01464 576 SMART HOX_1 366 430 IPR001356 GO:0003677
Cca07g01464 576 Pfam Associated with HOX 194 321 IPR006563 -
Cca07g01464 576 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 84 557 - -
Cca07g01464 576 MobiDBLite consensus disorder prediction 434 454 - -
Cca07g01464 576 SUPERFAMILY Homeodomain-like 368 432 IPR009057 -
Cca07g01464 576 SMART prehox3 189 322 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01464 Cca-Chr7 38279024 38285145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01464 1 576 Homeobox Transcription Factor Family AT5G02030 44.767 2.17e-120 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Cca07g01464 POX 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01464 - - vun:114185080 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01464 07 38279024 38285145 Cca07g01464 07 38279024 38285145 ECH