Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01445 ATGGACCAACCTAAGATTACAATGTTAATATTCACAACTATAGCGTTGTTGCTATCACGCGCCGAGGCGATGCGAAAGTGCGGTAATTGCGGTTCGAACCCGGTTCCCTACCCATTAAGCACGGGACCCGATTGTGGCGACCCGTGGTACAAGATCCGGTGCAGCGCGGGTACACTTTGGTTCGATGCACTCGCCGGATCATCCTACATGATCAGGTCCATTGATCCGTTAACCCGCAGGATCATAACCCGACCCGCAACACTCGCACCGAAGACGTGCGTGTCCACGGACTTCCACAGCGAAGGCATGCACCTGAACGAGACCCTTCCCTTTAGCGTGGCTTCGGGTAACACCATATTTCTCTATAACTGCACCGCCCACGCGCCTGCGATGAACTGCGCCGCAAGCAGCGCGTGTCACAAATACGCTAAGGAGCACGCGGAATTCGGCGCGTGCGGGCGCGTGGGCGTGTGCTGTGAGTATAAGAGTGGTGGGGCCCGCAGAGAGTATGCAGTTCTGGTGCACGGCGGAGGGTGCGCGGCGTATCAGAGTTTTGTGGATTTTAACGGCACGGCGGCGGAGGGTGGGGTGGGGATCGAGTGGGTGGCGCCACAGGAACCGGTTTGTAGAACCGCAGTGGATTGCAAAGAATTGGTGAACTCGAAGTGTGGAGTGGGCCCGGGTGGTGGGGTGCAAAGGTGCTTTTGTAATGCTGGTTTTAAGTGGGACCCAGTCAATGGTTTGTGTCAACCTCAAATTCAGAATACAAAATGCACAGGACATGGAAAAGACAACCACTGCAAAGTTCGGAAGAAAAAGAAAATGCTTCTGGCTGTGGTTGTTTCCTTGGGAGGAATAGTATCTATCATAACAGTGATAGGAGCCATTTTCTACAAGAAGCACAACGCAGCAAAGACAAAAAAAAACGAGGCCAAAACCAAAAGAAGAACAGAAATCTCAACCACCAAAGCGAGTGCCTTATCATCAAGAATCTTCACCGGCAGAGAGATAATGAAAGCCACCAACAATTTCGCCCCAGAAAACCTCATCGGCTCCGGCGGTTTTGGCGAAGTCTTCAAGGGAACATTCGACGACGGAACCGTCTTCGCCATCAAGCGTGCCAAGCTCGGAAGCACCAAAGGCATCGACCAAATGCAAAACGAGGTTCGAATTCTGTGCCAAGTGAACCACAGAAGTTTAGTTAGACTCCTAGGTTGTTGCATGGAACTTGAACACCCCATGCTGATATACGAGGAATTCCTAAAGTGGCACCAAAGACTCAAAATTGCACACCAAACTGCTGAAGGGCTTTCTTATCTTCACTCTTCTGCTGTGCCACCCATTTACCACCGCGACGTGAAATCCAGCAATATACTCCTTGATGAAAAGTTTGATGCAAAGGTTTCTGACTTTGGGTTATCTAGGCTCGTTGAACTGGCTGAAGAGAACAAGAGTCACATTTTCACTAGTGCTCAAGGGACACTAGGGTATTTGGACCCTGAGTATTATCGTAACTTTCAGTTGACGGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGTTGATGGAGCTGCTTACTGCTCAAAAGGCTATTGATTTCAATAGGGAGGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTGGAGGACAAGTTGATGGATGTGGTTGATCCTTTGCTTAGAGAGGGAGCTAGTGAAGTGGAATTGGAGACTATGAAGTCGTTGGGGTATCTTGCGGTTGCGTGCTTGGATGAGCAGAGGCAGAAACGGCCTTCGATGAAGGAAGTTGCTGATGAGATTGAATACCTGATTAAAATTGTTAAGGGTCAGGTTTCAAAATCATGA 1854 0.4946 MDQPKITMLIFTTIALLLSRAEAMRKCGNCGSNPVPYPLSTGPDCGDPWYKIRCSAGTLWFDALAGSSYMIRSIDPLTRRIITRPATLAPKTCVSTDFHSEGMHLNETLPFSVASGNTIFLYNCTAHAPAMNCAASSACHKYAKEHAEFGACGRVGVCCEYKSGGARREYAVLVHGGGCAAYQSFVDFNGTAAEGGVGIEWVAPQEPVCRTAVDCKELVNSKCGVGPGGGVQRCFCNAGFKWDPVNGLCQPQIQNTKCTGHGKDNHCKVRKKKKMLLAVVVSLGGIVSIITVIGAIFYKKHNAAKTKKNEAKTKRRTEISTTKASALSSRIFTGREIMKATNNFAPENLIGSGGFGEVFKGTFDDGTVFAIKRAKLGSTKGIDQMQNEVRILCQVNHRSLVRLLGCCMELEHPMLIYEEFLKWHQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDEKFDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEDKLMDVVDPLLREGASEVELETMKSLGYLAVACLDEQRQKRPSMKEVADEIEYLIKIVKGQVSKS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01445 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Cca07g01445 617 ProSiteProfiles Protein kinase domain profile. 344 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01445 617 Gene3D Transferase(Phosphotransferase) domain 1 415 615 - -
Cca07g01445 617 Gene3D Phosphorylase Kinase; domain 1 301 414 - -
Cca07g01445 617 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 16 612 - -
Cca07g01445 617 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Cca07g01445 617 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 612 IPR045274 GO:0007166
Cca07g01445 617 Pfam Protein kinase domain 347 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01445 617 SMART serkin_6 344 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01445 617 SUPERFAMILY Protein kinase-like (PK-like) 318 602 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01445 Cca-Chr7 37932828 37936322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01445 26 617 Receptor kinase-like Gene Family AT5G02070 53.333 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Cca07g01445 Pkinase 7.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01445 - - aprc:113862410 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01445 07 37932828 37936322 Cca07g01445 07 37932828 37936322 ECH