Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01443 ATGGAAGCCACTTCTATAACGCAGTTGTTGAAGGGCTTTTGTGATCACACACAGTGGAAATATGCTGTCTTTTGGAAACTTGACCACCATTTTCCTATGACTTTGGCCTGGGAAAATGGTTACCAGAAGAAAGATGCTGAGAAAAGTACGTGGGGTGACATCAATTTCCAATCCTCGAATGAGTTACATTCTTCAAGCGGTGAAAATACTGATTATTCAGGAGATTATTCGGCTCAACTACTCATGATTGAAATGTCTCATCGTAAATACAGTTTGGGAGAAGGGGTTGTTGGCAAAATAGCTCTCGCAAGGGATCATTTGTGGGTTTCCTGTGATGATATTCTCACCAGTAAATTTGACACTGATTTAATCCCTGAGTGTCCTGATGAGTGGATTCTTCAATTTGCATGTGGTATCAAGACCATTGTCCTGGTACCAGTTCTTTCGCTAGGGGTTTTGCAGTTCGGTTCAGTTGAAGCGGTTGCTGAAGACCTGGAATTTGTTACCAATATAAAGGAGAAATTCCATTCCATTCAATGCTTGGAAGCAAATGCTACACCTTTAAATTTGGGGACTGATTATCAAGATTGGTCATTCTCAGACCTGATGCATAATTTGATGGATAGCTTGGACGACTCGTCTTCTGTTACAAAATGTGTATTGAAAAGTGAAGTCTCAACTAGCACTGCTGCACTCAATTATCAGGATGATGATGGTTGCTTGTCTAGAGAAAACATATTGAAGTCTCTGAAAAGAAAAAATGAAAATGAGATAGGTTCCTCTTCCATTGACATGTCAACTGTTGCAAGGCATATTTGTAAGGTGGAGACAAAACCAAATCATATGGAAGAAGAGATATGGTCCTGGTCTCACTTGGCCAATAATGTGGGAGTATTTGGAGAGATGTCAAATAGATTGGAGTATTTCTCTGCTAAAAATTTGGCAAAGAAACAATTTGGAGGCACTGAAACCAGTGATGATGATACTAAGAATGTGAGTGACTTCACTTTTCCCTCACAGTCTGAATTGCACAAAGCACTTGGATCAGTTTCGTATGGAGAGACAGGCAAATCTATGTCAAAATATGTCTCTGTTGAGGATACTTACAGTACCCAAACTCTGGTAACCAATAAAAGAGAGCATGATCATTTTAAAGGGTTTGAGTTTCCCAATGATATTGATCCAGAATATCTTTTAGATGCTATTGTTGGCAATTTATGCAGTGCCTCTGATGATACTTCAAGTATATCTGACAGTGTCAGGTCTCTTACAACCATACAAACAGTGTTTAGCGGTTCCATTCAGCTAAAAGATAATTCAGAAGAAAAAACTTTGGTTGTGGATAAGTCAGATGTGAAAAATGATTTTGTACCTGCAGTTATGGTCAAGGGCAAAGATGAATTTTCGACCCATTTTACATCATCTTTTGATGGAAATGCAAGCTTATTGATCGAGGCACGACTGGAAAATGCTACTAGTCATATACAGCCTAATTGTGGACCAAAGCACTCTGGCACAGGAAAAAGAAGAACAAAAGGTGGTAACAACCCAAAGTCAAGGCCAAGAGATAGACAGCTGATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGTAGGTGTAGCATTGACAATCTCTTGGAACGGACCATAAAGCACATGCTGTACTTGAGAAAGATAACAAACCAGGCTGAGAAACTGAAACGATTTGCCAATCAGGTGGTTCCTGAGTGCAAAAGACAGAAAATCAATGGTAGCCAACCAGGAAGAAGCTGTGCGTTTGACTTCGAAAGTGAACTAGCATGGCCTATAGTCATAGAAGATCTGGAATGCTCAGGGCACATGCTCATAGAGATGATATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAAGTGATCCGAAAGCTGGATGTTACCATCTTAAAAGGGATCTTGGAAAATCGTTCAAGCAACAACTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTCTATGTCCTTTACTGCATCTTCTGCAGCTTAGGAGAAACCCTTGTCTCATGTAA 2073 0.4023 MEATSITQLLKGFCDHTQWKYAVFWKLDHHFPMTLAWENGYQKKDAEKSTWGDINFQSSNELHSSSGENTDYSGDYSAQLLMIEMSHRKYSLGEGVVGKIALARDHLWVSCDDILTSKFDTDLIPECPDEWILQFACGIKTIVLVPVLSLGVLQFGSVEAVAEDLEFVTNIKEKFHSIQCLEANATPLNLGTDYQDWSFSDLMHNLMDSLDDSSSVTKCVLKSEVSTSTAALNYQDDDGCLSRENILKSLKRKNENEIGSSSIDMSTVARHICKVETKPNHMEEEIWSWSHLANNVGVFGEMSNRLEYFSAKNLAKKQFGGTETSDDDTKNVSDFTFPSQSELHKALGSVSYGETGKSMSKYVSVEDTYSTQTLVTNKREHDHFKGFEFPNDIDPEYLLDAIVGNLCSASDDTSSISDSVRSLTTIQTVFSGSIQLKDNSEEKTLVVDKSDVKNDFVPAVMVKGKDEFSTHFTSSFDGNASLLIEARLENATSHIQPNCGPKHSGTGKRRTKGGNNPKSRPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITNQAEKLKRFANQVVPECKRQKINGSQPGRSCAFDFESELAWPIVIEDLECSGHMLIEMICNEHGLFLEIAQVIRKLDVTILKGILENRSSNNWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPCLM 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01443 690 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 175 IPR025610 -
Cca07g01443 690 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 687 IPR043561 GO:0003700|GO:0006355
Cca07g01443 690 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 687 - -
Cca07g01443 690 MobiDBLite consensus disorder prediction 493 524 - -
Cca07g01443 690 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 511 560 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01443 Cca-Chr7 37854718 37861296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01443 323 686 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.761 7.46e-49 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01443 - - gmx:100820605 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01443 07 37854718 37861296 Cca07g01443 07 37854718 37861296 ECH