Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01437 ATGAGAAAGATGGAGTTCAATACCCAAAACCCTAACAGATCTGAGATAAGATGGAGCTCAGAAGATCAGGGTGGTCCTGGACAAGTGAGATCTTATTCTTGTTCCTTTTGCAGGAGAGGGTTCTCAAATGCACAAGCACTAGGAGGCCACATGAATATCCACCGAAGAGATAGGGCAAAGCTCAAGCAATCTTCTGAAGAAAACTTGCTTTCCTTGGACAACTCAATCAAGGGCTCAAGTGACCACAATGACCCTTCTGATTTGGAAGAGAAGATTTTGTTTCGCTTGGGCTCTGGCGAAGATCAGAAGCATGCTACAAATCATAAAATGCCATTCAATTTCACTCACAGAGATGATCATGATCATGCACAACAAAGGGCCATGTTAATTGGTTCAACAGAAATTTCCCATCTTCCTTCATTTGTTTTGGGGCAAAGGATTGAGGAGAAGAAAGCTGAATTGGACCTTGAGCTTAGGTTAGGGCCGTTAGGCCTTCATCCTCAGGAGTCACCAACATTGAACACTAGAGCGTTCTTTTGA 540 0.4333 MRKMEFNTQNPNRSEIRWSSEDQGGPGQVRSYSCSFCRRGFSNAQALGGHMNIHRRDRAKLKQSSEENLLSLDNSIKGSSDHNDPSDLEEKILFRLGSGEDQKHATNHKMPFNFTHRDDHDHAQQRAMLIGSTEISHLPSFVLGQRIEEKKAELDLELRLGPLGLHPQESPTLNTRAFF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01437 179 Gene3D Classic Zinc Finger 14 87 - -
Cca07g01437 179 MobiDBLite consensus disorder prediction 7 26 - -
Cca07g01437 179 MobiDBLite consensus disorder prediction 1 26 - -
Cca07g01437 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Cca07g01437 179 PANTHER OS07G0101800 PROTEIN 75 161 - -
Cca07g01437 179 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Cca07g01437 179 PANTHER OS07G0101800 PROTEIN 2 68 - -
Cca07g01437 179 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 75 161 - -
Cca07g01437 179 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 2 68 - -
Cca07g01437 179 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01437 Cca-Chr7 37574605 37576880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01437 28 63 C2H2 Transcription Factor Family AT3G09290 88.889 1.42e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Cca07g01437 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01437 - - ccaj:109793777 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01437 07 37574605 37576880 Cca07g01437 07 37574605 37576880 ECH