Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01435 ATGGGTCGAGGTCCAGTGGGAGAGATAGTGGTGGCAGCGACAATGGCGGTGCAAGTGCAAGGGGGAGTAACAGGCCTGTTCACAGGACTTTTAGAATATATCTGGGGAATCCTTTTGATGCAGGTGGGTCTGCGCACGACAGCGGGGAAAGGAGATGGAGGAATTTTCCAGAAGATATGGATTGAAGTTTTGGTGCAGCAGCTCGCCGACAACGACCCCAACCGCTATGGCACGCCGCCTGCCGCCAAGGACGTCGTCAAGAACCTCCCCACCGTCACCGTCGACGAAGACACTGAACTCGGAGTTGAACCAGTGTGCGGTTTGCCAGGAGAGTTTGAGAAGGGGTCGCATGTGACGCAAATGCCCTGCAAGCACGTGTACCACGGTGACTGCTTGATTCCCTGGCTTCGCCTGCACAACTCTTGCCCCGTGTGCCGGTACGAATTGCCCACAAACGACGCCGATTACGAGAATCGGACGCAGGGGAACGCCGGTGATGGGTCGAGGTCCAATAAAATCAAATAA 525 0.5581 MGRGPVGEIVVAATMAVQVQGGVTGLFTGLLEYIWGILLMQVGLRTTAGKGDGGIFQKIWIEVLVQQLADNDPNRYGTPPAAKDVVKNLPTVTVDEDTELGVEPVCGLPGEFEKGSHVTQMPCKHVYHGDCLIPWLRLHNSCPVCRYELPTNDADYENRTQGNAGDGSRSNKIK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01435 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 61 167 - -
Cca07g01435 174 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Cca07g01435 174 PANTHER OS06G0101300 PROTEIN 61 167 - -
Cca07g01435 174 MobiDBLite consensus disorder prediction 155 174 - -
Cca07g01435 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 152 IPR013083 -
Cca07g01435 174 SUPERFAMILY RING/U-box 111 152 - -
Cca07g01435 174 Pfam Ring finger domain 105 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01435 Cca-Chr7 37543670 37545747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01435 61 157 C3H Transcription Factor Family AT5G01980 47.475 2.91e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01435 K11982 - gmx:100785289 180.259