Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01429 ATGTCCCTTGAAGAGTCGCTAAGATCTCTGCCGCTGGATTACCTGAACCTCCTCATCAACGGCCAGGCCTTCAGCGACGTCACTTTCAGCGTGGAGGGACGTCTGGTTCACGCGCACCGCTGCATACTGGCCGCGCGGAGCCTCTTCTTCAGGAAATTCTTCTGTGGGCCGGACCCACCCTCTGGCCTGGACCCCACCGGCCCAAGGATCAACTCGCGCTCCGGAGTCATACCCGTCAACTCCGTCGGCTCCGAGGTCTTCCTCCTCATGCTCCAGTTTCTCTACGGTGGCCTGGGGTGCGGGAGAACGGGGGGTGTGGGGTGCGGGAAGGAGGTGGGGAAGGGTGCGCTCAACCATGGTGAGATCGACCAGGTTGTGCTCGACCATGAAGAGATCGGCTAG 402 0.6169 MSLEESLRSLPLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPTGPRINSRSGVIPVNSVGSEVFLLMLQFLYGGLGCGRTGGVGCGKEVGKGALNHGEIDQVVLDHEEIG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01429 133 Pfam BTB/POZ domain 16 97 IPR000210 GO:0005515
Cca07g01429 133 Gene3D Potassium Channel Kv1.1; Chain A 7 100 IPR011333 -
Cca07g01429 133 PANTHER REGULATORY PROTEIN NPR5 1 97 - -
Cca07g01429 133 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 97 IPR044284 GO:0099402
Cca07g01429 133 SMART BTB_4 25 132 IPR000210 GO:0005515
Cca07g01429 133 SUPERFAMILY POZ domain 10 97 IPR011333 -
Cca07g01429 133 ProSiteProfiles BTB domain profile. 25 97 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01429 Cca-Chr7 37378516 37388222 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Cca07g01429 BTB 1.6e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01429 K14508 - ccaj:109798552 208.764