Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01414 ATGCAAAGGGGTAAGATGAAGTTGGATGAGGATCTGGGTCCTGATCGTGAGGATGATTTCCAAACTGATGATGAAGAAAATCAGGCACAAAGGGTGTTTGAACATTTATTGGATGATGATTCTGAATCAGATAATAATCCTTCTTCACCAAGTTTGTCTCATGAGGTTTCCATTACCTCTTGGCCTCAAAGCTATAGGCAATCTATGGACATGTTAACTAGTGTAACACCACCAGGACTTACTCTACTAAGGAGATTTGGTTCAATTGGGGGAGATAACTCTCCCACGGCATCATTCAAAAGACTTCAGGAAAATCAAGAGGATTCTTCTTTAACTATACCTTTTATTTCTGAAACAAGTTCAGTAAAAATAGAGGATCAAGTTGCCTCAACACCATATGTGCAACCACTTAATAGTGCTAAATTTTCTGTACATGAATTGCCACCATCACAACAACAATGTTCAGTTGCAAAATCAATAATTAATGGAATCAATATATTGTGTGGGATAGGACTTCTTACCATTCCATATGCAATCAAAAAAGGAGGGTGGTTAAGCCTTATAATACTGATAATGTTTGCTATCATGTGTTGTTATACTGGCATGTTATTAGTAAGATGTTTAGAAAACTACCCTGAACTTAAAACCTATCCAGATATTGGCCAAGCTGCTTTTGGAATTGCTGGTCGCTTGGGAATTGCGATTATGTTATATGTGGAACTTTTTGCCTCTTGTGTTGAATATATAATACTAGTCAGTGATAACCTCTCATCATTGTTTCCTAACACTCACATGACATTTGGTGGAACTGACTTCAATGATGAACAAATTTTTGCTATCACAGCAGCTATTCTAGTTCTACCAACTGTTTGGCTACGAAATCTAAGCTTACTTTCTTATATTTCAGTTGGAGGAATATTTGCAACAATACTTGTTGCACTCTGCTTGTTTTGGGTTGGGACGATAGACCAAGTTGTTGGATTTAAGCCAGGAGAAAAAGTTTTAGACATGGAAAACATATCTGTCTCAATTGGTCTTTATAGTTTTTGTTTTGCTGGTCATGCAGTTTTTCCTAACATATACTCTTCCATGAAAGAACCATCCAAATTCCCCATCGTGTTATATATTTGCTTTGCCTTTTGCCTTGTTATGTACATGAGCGTGGGAATAATGGGCTATTTAACGTTTGGGGACTTAGTTGCATCTCAGTTTACCTTAAACATGCCCAAAGAATTATATGCATCTGACATTGCAACTTGGACAACTGTTGTGACTCCAGTGGCAAAATATGCTTTAACATTATTGCCTATAGCATTAAGCATAGAGGAACTCACTACCTCTCCTAGGCTAAGATGTCATGCTATGTCTGTTCTTATCAGAACAATTTTAGTGATATTAAGTTTACTTGTGGCTCTTTATATTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTACTATCAATATTGGTTGCAATTATTTATCCTTGCGCATGTTATCTCAAGCTACATAGTGGCAGAATATCAAATCTAGAGATAACAAATTGCGTTTTGATAATTGTTTTGGGGTTGATAAGTGCTTGTGTTGGAACACAATCAGCTATTTCAAAAATATTGGGCGAAGGGGATTAA 1635 0.3645 MQRGKMKLDEDLGPDREDDFQTDDEENQAQRVFEHLLDDDSESDNNPSSPSLSHEVSITSWPQSYRQSMDMLTSVTPPGLTLLRRFGSIGGDNSPTASFKRLQENQEDSSLTIPFISETSSVKIEDQVASTPYVQPLNSAKFSVHELPPSQQQCSVAKSIINGINILCGIGLLTIPYAIKKGGWLSLIILIMFAIMCCYTGMLLVRCLENYPELKTYPDIGQAAFGIAGRLGIAIMLYVELFASCVEYIILVSDNLSSLFPNTHMTFGGTDFNDEQIFAITAAILVLPTVWLRNLSLLSYISVGGIFATILVALCLFWVGTIDQVVGFKPGEKVLDMENISVSIGLYSFCFAGHAVFPNIYSSMKEPSKFPIVLYICFAFCLVMYMSVGIMGYLTFGDLVASQFTLNMPKELYASDIATWTTVVTPVAKYALTLLPIALSIEELTTSPRLRCHAMSVLIRTILVILSLLVALYIPYFGSLMALIGSLLSILVAIIYPCACYLKLHSGRISNLEITNCVLIIVLGLISACVGTQSAISKILGEGD 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01414 544 MobiDBLite consensus disorder prediction 1 57 - -
Cca07g01414 544 Pfam Transmembrane amino acid transporter protein 154 536 IPR013057 -
Cca07g01414 544 PANTHER AMINO ACID TRANSPORTER AVT1D 46 539 - -
Cca07g01414 544 MobiDBLite consensus disorder prediction 43 57 - -
Cca07g01414 544 MobiDBLite consensus disorder prediction 25 42 - -
Cca07g01414 544 PANTHER OS05G0424000 PROTEIN-RELATED 46 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01414 Cca-Chr7 37211984 37217041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01414 6 542 Amino Acid or Auxin Permease AAAP Family AT5G02180 49.275 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01414 K15015 - pop:7468814 596.275