Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01409 ATGGTTGAGTCAGCCATGTCAAAGGCAATGATGGAGGAAGTAATGGCCACTTGGTCAGAGGGGCCAGAGGATGATGACCTTGTGAGAGAGCTTTTGGATGATGTGTCTCCCCTTCTTGTGGTTCCAGAGGATGCAATAACTCAACCCCCCAACAACACAAAAAAAGCCTCTTCAAGTGACCAAGCCTTTAATAGATTCATGTCCAACATTTACTCAGGACCTACCATATCAGATATTGAAAATGCTTTGTCAGTTACCAACCAAAGAGAACACTTCCCACAACTCTCATCAGCAAGATTTTTCAGAGTTTCCATATTGGAAAAGGGTTTGAGTAAGATTGAGAATAAGTATACCCTGAAAATCAAATGCTTTGGCAATGGGATGAGTGATGATGGATATAAGTGGAGAAAGTATGGTCAGAAATCCATCAAGAATAGCCCAAATCCTAGGAGCTACTATAGGTGCACCAACCCAAGATGCAATGCTAAGAAGCAGGTTGAGAGATCAAATGAGGACCCAGACACTCTCATCATAACCTACGAAGGGCTCCACTTGCACTTTGCTTACCCATATTTCCTCATGGGCCAACAACAccaatctcattcccacccaccaatcaagaagcccaagcccacctctttgcaagcccaatcccaagcccaTAATAGGGCACATTGTGTTAATGAAGCCCAACATACCCATGAAGCCCGGGAAGCCCAAGAGAATGATACTTTGGGTGTGATGTCATCCACTTCATTGGACTCCCAACAAGGCCTGGCCCAAGACAATTTTGGCTCACAAGGGCTGCTTGAAGATATGGTGCCCTTCATGGTTAGAAACCCATCAAACAATGTCAATAGTTCTCTCACAAAATTTTCTTGTTCTTCATACCGTTCTCCTCCAACATCACCTCTTTGGACTTCTAATTACTCCACCTCCTGTTATGCCGTTGGCTTAAATTCTAGCATTTGA 972 0.4023 MVESAMSKAMMEEVMATWSEGPEDDDLVRELLDDVSPLLVVPEDAITQPPNNTKKASSSDQAFNRFMSNIYSGPTISDIENALSVTNQREHFPQLSSARFFRVSILEKGLSKIENKYTLKIKCFGNGMSDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLMGQQHQSHSHPPIKKPKPTSLQAQSQAHNRAHCVNEAQHTHEAREAQENDTLGVMSSTSLDSQQGLAQDNFGSQGLLEDMVPFMVRNPSNNVNSSLTKFSCSSYRSPPTSPLWTSNYSTSCYAVGLNSSI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01409 323 SUPERFAMILY WRKY DNA-binding domain 127 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01409 323 Gene3D WRKY domain 124 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01409 323 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01409 323 MobiDBLite consensus disorder prediction 198 223 - -
Cca07g01409 323 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01409 323 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 20 293 - -
Cca07g01409 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 293 IPR044810 GO:0003700
Cca07g01409 323 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01409 Cca-Chr7 37067911 37071488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01409 64 280 WRKY Transcription Factor Family AT5G43290 44.934 2.40e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca07g01409 WRKY 6.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01409 - - gmx:100810459 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01409 07 37067911 37071488 Cca07g01409 07 37067911 37071488 ECH