Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01387 ATGGGTAACCGAATCGGTAACCTCTTTCGCTGTTCCACCGGCGACTCCTCCGGGAGGTTCGAGGACAGAGTTTCCTTCCTCTCCAAGCAACGCCACAGAGACCTCGGAAACTCCATCTGCTACGTGAGACCCGACACGTGTCGGTTCTCCGGCGACGGAGACGTCACCGTCATGACTTTCCGGTCGGTCTTCGGCGCCACCGTGAGCGCAAACTCGTCGGCGACGGCTTCGACGTCGCTCGACGACTCGCTCCAACACGGCACCGTTTTGGATTCCTCTGCTTCGTTTCAGAGCTCTGCCTCCTTCACTTCCACCGTGGTGCCTTTTGATCGTGGATTCTCTGTGGGAGGGTCCACGGAAAGAGGGTTGTATTGGGGTCCTTACGATCGTGATGGCTCCATTGAGAGAGTTTCTCCTGAGGAACCTGTGAAGAAGGTGAAGAGAAGTAGCAGAATTTTGAAAAAGTTTTTCAGCAAGTTTTCTTCCATTGGGAGAATGTCGATTTTCAAGAAAAATGACAACGCTAATGCTAGAGTTAGTTGTAGTACTAATTTGAGTGCTGAGTTGAGTTTGAATGGTGTTGAGGGTGATAACTATTTGgatgatgatgatgatgatgatgatgTGTTGATGGGGTGTGAGAATCTTCATTGGGCTCAAGGGAGAGGTGGTGAGGATCGTGTGCATATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGGTTTAATGGCCCTGATGCCACTGATTTCCTTCTCAACAATTTGTTTTATGCTGTGAATGACGAGCTCAAGGAGATGCTGTGTGGTCACAACAAGAAGTTTGAATCCATGGCTATGGATTCAGGCTCTTTGGAGTTTAAGGGAAATGGGTTGGTTCATGGTTGTTGTTCTTCAGGTGAAAACAAAGAAAACTGTCCAATAGTAAATGAAGAGTTGAATTTGGAATGTGGAAAAGTGGAGTTGAGTGACTCAAATCATGTGTTGCAAGCTCTTTCAGAGGCGTTGAGGAAGACTGAGGATGCATTCATGAGGATTTCTGATGAGATGATTGGTCACAACCCTGTGTTGGCAATGATGGGTTCTTGTGTTTTGGTGATGGTGATGAAGGGTCAAGATGTTTACTTGATGAATGTGGGAGATAGTCGTGCTGTGTTGGCCACTCACTCTGGGGATTCTCTTCAGCTCACCATGGAGCATAGCACTCATGCGAAAGAGGAGGTTTACAGAATCAGGAGGGAGCACCCTGATGACCCTTTAGCAGTAACCAAAGGCCGGGTGAAGGGTTGCTTGAGTGTCACAAGGGCTTTTGGGGCTGGGTTCCTTAAGCAGCCTAAGCAAAACAATGCAGTGTTAGAGACTTTCAGAGTGAGCTACATAGGGGAATCCCCATACATCACATGTTCCCCTTCACTCCACCACCACAAACTCAGTCCAAATGACAAGTTCCTGATATTATCTTCTGATGGACTCTACCAATACTTCACCAACGAAGAAGCAGCTGCCAAAGTAGAGTCATTCATCACCATGTTTCCAGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCACTTACTCGAGCAGCAAAAAAGGCTGGTATAGAGTTCCATGAGTTGCTTGATATTCCACAAGGGGAACGCCGTCATTACCATGATGACATTTCTATTGTCATAATCTCCTTGGAGGGAAAAATATGGCAATCATTGGTGTAA 1725 0.462 MGNRIGNLFRCSTGDSSGRFEDRVSFLSKQRHRDLGNSICYVRPDTCRFSGDGDVTVMTFRSVFGATVSANSSATASTSLDDSLQHGTVLDSSASFQSSASFTSTVVPFDRGFSVGGSTERGLYWGPYDRDGSIERVSPEEPVKKVKRSSRILKKFFSKFSSIGRMSIFKKNDNANARVSCSTNLSAELSLNGVEGDNYLDDDDDDDDVLMGCENLHWAQGRGGEDRVHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYAVNDELKEMLCGHNKKFESMAMDSGSLEFKGNGLVHGCCSSGENKENCPIVNEELNLECGKVELSDSNHVLQALSEALRKTEDAFMRISDEMIGHNPVLAMMGSCVLVMVMKGQDVYLMNVGDSRAVLATHSGDSLQLTMEHSTHAKEEVYRIRREHPDDPLAVTKGRVKGCLSVTRAFGAGFLKQPKQNNAVLETFRVSYIGESPYITCSPSLHHHKLSPNDKFLILSSDGLYQYFTNEEAAAKVESFITMFPDRDPAQLLIEEALTRAAKKAGIEFHELLDIPQGERRHYHDDISIVIISLEGKIWQSLV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01387 574 Gene3D - 191 572 IPR036457 -
Cca07g01387 574 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 16 574 - -
Cca07g01387 574 Coils Coil 333 353 - -
Cca07g01387 574 SMART PP2C_4 209 563 IPR001932 -
Cca07g01387 574 Pfam Protein phosphatase 2C 325 534 IPR001932 -
Cca07g01387 574 ProSiteProfiles PPM-type phosphatase domain profile. 210 565 IPR001932 -
Cca07g01387 574 SUPERFAMILY PP2C-like 223 566 IPR036457 -
Cca07g01387 574 CDD PP2Cc 224 565 IPR001932 -
Cca07g01387 574 PANTHER PROTEIN PHOSPHATASE 2C 16 574 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01387 Cca-Chr7 36408062 36411658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01387 1 574 PP2C-type Phosphatase Gene Family AT1G07630 45.266 2.96e-173 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01387 - K01102 gmx:100794388 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01387 07 36408062 36411658 Cca07g01387 07 36408062 36411658 ECH