Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01385 ATGCCTTCGTCATCTCCCAATTTCCATCTTCGCGCTCTCAGAATTTGGTCCTCCAAGGACTACGCAATCGCCGCcttcatcttcttcctcctcttctcgctccttctcttcACTCACTTCGATCCCAATCCTTCCCCTTCCCACTCTCACTCTTCCCACCTCGTCCCCCTCACGCTCCTCCGCAACGCCCGCCACACGCCCGCGCTTTGCTTGGACGGCAGCGCTCCCGGCTACCATTTCCGAAGCGGCTTCGGATCCGGATCTCGCAATTGGCTCATCCACGTCGAGGGAGGAGGGTGGTGCAATTCGATATCTTCATGTTCTAAGCGAAAATTCTCTCATTTGGGGTCTTCCAAGTATATGGAAAAATTTATTCCTTTTTCAGGAATATTGAGCTCTGACCCCTACCAAAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGTTATTGTGATGGCGCATCTTTCTCTGGTCACCCGGAGAGTGAGAGAGCAAGTGGGTTGTTCTTCAGAGGCCAGGTCATATGGGATGCTATTATGGATGAACTCTTGTCAATTGGCTTGTCTACAGCAAAACAGGCTTTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTTATACACTGTGATAACTTCCGACAATTACTTCCAAAGGAGGCAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCATGATGTTTTCCAGCTTCAGGGTCTTGCAAAAAGTTTTCCCAAAGATTGCATTGCTAAAATGGAACCATCCAAGTGTCTCTTTCCGTCAGAAATTGTTAAGAACATGAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATTTTGGTACCTCAAGAATCAGATCCCCAAGGTCACTGGCAAAGCTGCAAACTGAACATTCGCAATTGTAATGCTAACATGATTGATAAACTTGACAGTTTCCGTGGCTCTTTGCTGAAGACTCTGAATGAATTCCAACAACGAAAGGAGATTGGAATGTTTATAAATTCCTGTTTTATCCATTGCCAGACGGAGATGGAAATGACATGGCACTCACCCAACTCTCCTAAAATAAACGATAAGACAATTGGTGAATCTGTTGGTGATTGGTACTTTGACCGAGAAGCGGTTAAGCGTATTGACTGCCCTTCGCATTCGTGCAATCCCACTTGCCGCAATATGGATTTCACCTGA 1263 0.445 MPSSSPNFHLRALRIWSSKDYAIAAFIFFLLFSLLLFTHFDPNPSPSHSHSSHLVPLTLLRNARHTPALCLDGSAPGYHFRSGFGSGSRNWLIHVEGGGWCNSISSCSKRKFSHLGSSKYMEKFIPFSGILSSDPYQNPDFFNWNKVKIRYCDGASFSGHPESERASGLFFRGQVIWDAIMDELLSIGLSTAKQALLSGCSAGGLATLIHCDNFRQLLPKEATVKCLADAGFFLDEKDISGNSTMRSFYHDVFQLQGLAKSFPKDCIAKMEPSKCLFPSEIVKNMKTPLFLVHPAYDFWQIRNILVPQESDPQGHWQSCKLNIRNCNANMIDKLDSFRGSLLKTLNEFQQRKEIGMFINSCFIHCQTEMEMTWHSPNSPKINDKTIGESVGDWYFDREAVKRIDCPSHSCNPTCRNMDFT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01385 420 Pfam Pectinacetylesterase 50 398 IPR004963 GO:0016787
Cca07g01385 420 PANTHER NOTUM-RELATED 15 414 IPR004963 GO:0016787
Cca07g01385 420 PANTHER PECTIN ACETYLESTERASE 4 15 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01385 Cca-Chr7 36385929 36399637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01385 14 385 Carbohydrate Esterase AT3G09410 57.068 2.34e-162 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01385 K19882 - gmx:100792819 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01385 07 36385929 36399637 Cca07g01385 07 36385929 36399637 ECH