Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01382 ATGTCTCCAGCTACAGGTTCATCAAGATGGAGCCCTACCACAGAACAACTCATGATCTTGGAGGAACTGTACAGGAGTGGCATTAGAACTCCTAGTGCCTCTCAAATTCAGCAAATAACAACACACCTTTCCTTCTATGGCAGGATAGAGGGAAAGAATGTGTTCTACTGGTTTCAGAACCACAAAGCTAGGGATAGGCAGAAACTCAGAAGGAAACTcaccaagcaactgcagctacagcagcagcaacaacaacaacaactccaacTCCATCATTGTCAACTCAACCAGGATATCACTAACCATTATGTTGCTTATCCTCCTCGTTCTACCACCCAAGATTTTCCCTTTTTTAACTCACCTACCTTGCTTTTTCAGGGAAGAGCTGCAAACACATCAGAACAGGCATTCAATTGCAAATGGAGTGTGTATAACAACCCTCAAAGTAATTTGGTGGAGAAGAAAGAGACGACATTCTGTAACTACGGTTGGACAACACTTGTCGATGCTTATCAAGCATCTTCATGTTGCACTCGACCTCTCAAGACTCTTGATCTCTTTCCACTGACAACCACCAGAATCAATGAAGACTGCACCACACCACCCAAGTAG 612 0.3987 MSPATGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQQQQQLQLHHCQLNQDITNHYVAYPPRSTTQDFPFFNSPTLLFQGRAANTSEQAFNCKWSVYNNPQSNLVEKKETTFCNYGWTTLVDAYQASSCCTRPLKTLDLFPLTTTRINEDCTTPPK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01382 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 200 IPR044555 GO:0003700|GO:0099402
Cca07g01382 203 SUPERFAMILY Homeodomain-like 6 71 IPR009057 -
Cca07g01382 203 ProSiteProfiles 'Homeobox' domain profile. 3 68 IPR001356 GO:0003677
Cca07g01382 203 Pfam Homeodomain 8 67 IPR001356 GO:0003677
Cca07g01382 203 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 200 - -
Cca07g01382 203 Coils Coil 66 86 - -
Cca07g01382 203 Gene3D - 2 68 - -
Cca07g01382 203 CDD homeodomain 9 68 IPR001356 GO:0003677
Cca07g01382 203 SMART HOX_1 5 72 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01382 Cca-Chr7 36307563 36308690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01382 1 75 Wox Gene Family AT2G28610 82.667 1.16e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Cca07g01382 Homeodomain 6.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01382 - - gmx:102663963 280.796