Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01352 ATGGCACTAAATAAGACAGGAAACTTGTTAGGTACCAACACTGGTAAGGACCCTAGTGTGTTTCCTCAACACGCCCAGCCAGAATTATCCAGTGTTGTTTCAAATACAGGACGTCATGTACATAATAATATTGCTATACAGACCGGAGAAGAATTTTCTGTGAATGTTGGTCTTGATGGAATTGCTGCTGGAAGGGTTCCTGTTTCACTTGATATATCTCGAAGTTGCGAGAATGTGTTTGGGTTGAATAAGGAGAATGGCCATGTGAGATATGAAGATCTTACTAATATTTTGGGATTGAGGAGAATGGACTCTGAGAATTCTTCTGACATTTCTGACTTCATCTCAATAAAACAGCCAGCACAGGAGACGGAAAACAGAGCTTCTGTAAACAGTTTAAGCAAAATTCAAAAGGGAGATGGTATGCTGGGGAAAGAACCTGTTGGTGACCAGTCTGGTCTCATCGTGTCACCCCGTCGCAGATACGAAGCTTCTCTGTCCAATGAATTTTCTGGTTCAGGAATTTTTGATGATTTCCTGTCTGGGAAAATGAAGTTTCTATGCAGCTTTGGGGGCAAAATATTACCGAGACCCAGTGATGGGAAACTCAGGTATGTAGGCGGAGAGACCCACATTATATCTATCCGAAAAGATATTTCATGGCAACAACTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATCAAGTACCAGCTTCCAGGGGAGGATCTTGATGCTCTGATATCTGTTTCCTCTGATGAAGATCTTCAAAATATGAAGGAGGAATACCATGGGCTTGAAAGTCATGAAGGTTCTCAAAAACTTAGACTATTTTTGGTTCCTTTGGTGGAATCTGAAGAGACATCATCAAAAGAGGTGAGCGCGCAGAGTGATCCTGATTACCAATATGTTGTTGCGGTAAATGGCATAGGTGACCCTAATAGGACAAACATCGGTGGGCAAAGTTTGGCGAATGAAGCCATTCCAATGGGGACAGATTTGAATTTGACTCCAGCTTTTCAAAAAACTCCCAATGCCTCTTCTCCTTTTGAGATCAGGGATGGTATTAATGCTTTAAACCCAGATGGGATTTTGAATGATTCCCTGAATTTGCAAAGATCTTTGCCAATTCCTCCAACTCCAATTCAGGTAACAAGTTCTAGCACAGGTTATATACAATTGCTCAGCAACAACTCATGCCAGGGAAGTATTGAGAGCAATGCATCATTTACTACTGCTCAGCTACATCCTGAGTACTCCATAAGAATTGCTGATTGCAGATTCCCTCAACAAGTGGCTGCTACTTTGTCAAGTGACACTCATACCTATCAGCATGTTGATGTTGATCAGCCCAAGAAGCTCAATGGAGGGCATGTGGATTACAATCCTGGCAAGGAATTAGTGACTCCTGTATATGTTAATCCAAGCGACGGTTACAGTCATGAAGTGTTCGGTGGAAGGTCCTTGCAAAAGGAAAGAAGAGTATGCTCTGGAAATCCTCTTACATGCTTGGATGATCCATTTTATCAACAGGATGAATCTTATGGAATTAATGACTCCCCTCATGGGATGCTCCATGCCTTTTCTGATCCACAGTTGCACGTGAGTGGAGCAAAGTCTGGTTACTGCTCACAAAATGTAACTAGTCAAACGTTTTCCCTGAACCTTGAAAAGGCTCGATTATCTTCAATTATACTCCCTAGTGTCTCACAAGTGAACCTTACGGAGCATCAGCATGATTCCATTGTCCATCTTCCTCAAATACAAAGTAAGATGCCAAAAGTTGAGTCAGCTGAGCTGCACAAAAGGCAAGATTCAGCATCTTCTCCATACTATGAATCATTGGGAATGAATGATCCTGTTCATAAGGATAGCATTTTACCTGAAAAAATAAACCTTATTGCTCAAACTGACTTGAATGGAGCCAGCTATGTTGCAAAGGATATTCAGGGAAATTCTGTGAAATTAGAAAGGATGAAGATAATTGAAGAAAGTAATCCAATTTCCAAAGATAGCAAGGTTCATGAGGGGAAATCAACTGTTGTTGATATGGGAGAAGTGACTAAGTTGCATCTTTTGGATTACTTCCCTACTAATAACTTAAATGCTAAGATTAAATTGCAAAAGAATTGGGAGCTTCCTTCTGAGGGTATAATTCCTGCTCCATCTGGCATGATGGGCCCCTCTCTAAATTGTCTTGTGGAAAAGACCCCGTCTGATCTTGACATGAGCCAAAGGACTAGTGATCACAAAAGATGTGCTTTGCCTGAAGGTCTGAATGGTGAACAATGGATTGATTTTTCATCGACTGGAAATTTTGATTTAAATGTTCCATTTTTAAACTGTGACGTAGGCTCTTGTGACAAAAGTTCTCAAGGGGGTAATATGTTCAAGCTGTCCATTTACCCAGATTCTCTTAAAGCTGCACAAATTCATCCTTCTAAGAATCAGATGTCTACTGGTTTTCAAGAAAATCCAATAGTAAGCTCTTCAAGTTTGTATCCTGCTGCATTTGGTGATGATCTCGGTCCAAGTCTAAACATGCCTATGAACGGCCTGGATAATTCAAGCAATATGATGTCTTTTACAAAGGCACCATCTTTTTTTGATAACTTGATTACCAGGACTGGTCAAATGGTTGATCAGTTTATCCCTGAACACTCTTCCTCTGGAATGTCCAAAGTTGAAGCTAAAATTTCAGAACAATCAAAGAATTTAGATAGGGTGAATGATGTCAATCGAATGGATCCATTTTTCAATGTAGAAGACATGACTGGTGTTGATCGTCCATATATTTCAGATGATGTTGGAATTGGTGTTGTATCCCCATGTCATAGCATCGTCCCTGAGTCTGAACCTGAGGATTTTAATGATGATCAAACAGACAAAAGTGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCATTTATGGTTTACAGATAATAAGGAATGCTGATCTTGAAGAACTTACAGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTGCAGGGAGGTCTTCTGAGCAAGAACGGTTGGCAAAAGATTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCATCATCCCAATGTGGTAGCATTTTATGGAATAGTACCAGATGGGACCGGTGGAACCTTAGCAACTGTAACAGAGTATATGGTCAATGGTTCCCTTAGGCACGTCCTTGTAAAGAACAAAAGATTACTAGATCGTCGTAAAAAACTAATAATTGCCATGGATGCTGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAACTTGCTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGGATTAAACGTAATACCCTAGTATCTGGAGGCGTGCGGGGAACCCTTCCGTGGATGGCACCGGAATTGTTGAATGGGAATAGCAGCCGGGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGTTACTAACAGGGGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATTTTAAAGAACACTCTTAGACCTCCAGTGCCCGATCGATGTGATTCTGAATGGAGGAAACTTATGGAAGAGTGTTGGTCACTGGATCCCGAAAACCGACCATCGTTCACAGAGATAACTAGCAGGGTTTTTGGTGACGCTTCTACAGAGGAGGATGTCCTTGGTCGGAGTACGAGAAAGGTTAAACGAAAGTCAAATGTCGCAGTTACGGAGGATGGTACGAGTATGGAGAAAGAGAACACAAATCAGCCAGATGAGGAGGTTCCACCTCCTCCAATTTCGGAAGAGGATAGAGCAAAGTTTCTTGGAAACCAAGCTTACGCGCTCATGGGCTCGTAA 3978 0.4113 MALNKTGNLLGTNTGKDPSVFPQHAQPELSSVVSNTGRHVHNNIAIQTGEEFSVNVGLDGIAAGRVPVSLDISRSCENVFGLNKENGHVRYEDLTNILGLRRMDSENSSDISDFISIKQPAQETENRASVNSLSKIQKGDGMLGKEPVGDQSGLIVSPRRRYEASLSNEFSGSGIFDDFLSGKMKFLCSFGGKILPRPSDGKLRYVGGETHIISIRKDISWQQLMKKTLGICNQPHTIKYQLPGEDLDALISVSSDEDLQNMKEEYHGLESHEGSQKLRLFLVPLVESEETSSKEVSAQSDPDYQYVVAVNGIGDPNRTNIGGQSLANEAIPMGTDLNLTPAFQKTPNASSPFEIRDGINALNPDGILNDSLNLQRSLPIPPTPIQVTSSSTGYIQLLSNNSCQGSIESNASFTTAQLHPEYSIRIADCRFPQQVAATLSSDTHTYQHVDVDQPKKLNGGHVDYNPGKELVTPVYVNPSDGYSHEVFGGRSLQKERRVCSGNPLTCLDDPFYQQDESYGINDSPHGMLHAFSDPQLHVSGAKSGYCSQNVTSQTFSLNLEKARLSSIILPSVSQVNLTEHQHDSIVHLPQIQSKMPKVESAELHKRQDSASSPYYESLGMNDPVHKDSILPEKINLIAQTDLNGASYVAKDIQGNSVKLERMKIIEESNPISKDSKVHEGKSTVVDMGEVTKLHLLDYFPTNNLNAKIKLQKNWELPSEGIIPAPSGMMGPSLNCLVEKTPSDLDMSQRTSDHKRCALPEGLNGEQWIDFSSTGNFDLNVPFLNCDVGSCDKSSQGGNMFKLSIYPDSLKAAQIHPSKNQMSTGFQENPIVSSSSLYPAAFGDDLGPSLNMPMNGLDNSSNMMSFTKAPSFFDNLITRTGQMVDQFIPEHSSSGMSKVEAKISEQSKNLDRVNDVNRMDPFFNVEDMTGVDRPYISDDVGIGVVSPCHSIVPESEPEDFNDDQTDKSEFLSDAMIAEMEASIYGLQIIRNADLEELTELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGTGGTLATVTEYMVNGSLRHVLVKNKRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGILKNTLRPPVPDRCDSEWRKLMEECWSLDPENRPSFTEITSRVFGDASTEEDVLGRSTRKVKRKSNVAVTEDGTSMEKENTNQPDEEVPPPPISEEDRAKFLGNQAYALMGS 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01352 1325 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 120 1255 - -
Cca07g01352 1325 CDD PB1_UP2 187 282 - -
Cca07g01352 1325 Gene3D Transferase(Phosphotransferase) domain 1 1081 1302 - -
Cca07g01352 1325 Coils Coil 895 915 - -
Cca07g01352 1325 Gene3D Phosphorylase Kinase; domain 1 986 1080 - -
Cca07g01352 1325 ProSiteProfiles Protein kinase domain profile. 993 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01352 1325 SUPERFAMILY CAD & PB1 domains 199 284 - -
Cca07g01352 1325 MobiDBLite consensus disorder prediction 1 23 - -
Cca07g01352 1325 Pfam PB1 domain 200 284 IPR000270 GO:0005515
Cca07g01352 1325 Gene3D - 202 284 - -
Cca07g01352 1325 MobiDBLite consensus disorder prediction 1268 1311 - -
Cca07g01352 1325 PRINTS Tyrosine kinase catalytic domain signature 1075 1088 IPR001245 GO:0004672|GO:0006468
Cca07g01352 1325 PRINTS Tyrosine kinase catalytic domain signature 1112 1130 IPR001245 GO:0004672|GO:0006468
Cca07g01352 1325 PRINTS Tyrosine kinase catalytic domain signature 1227 1249 IPR001245 GO:0004672|GO:0006468
Cca07g01352 1325 PRINTS Tyrosine kinase catalytic domain signature 1183 1205 IPR001245 GO:0004672|GO:0006468
Cca07g01352 1325 PANTHER SERINE-THREONINE PROTEIN KINASE 120 1255 - -
Cca07g01352 1325 Pfam Protein tyrosine and serine/threonine kinase 996 1254 IPR001245 GO:0004672|GO:0006468
Cca07g01352 1325 ProSitePatterns Protein kinases ATP-binding region signature. 999 1024 IPR017441 GO:0005524
Cca07g01352 1325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1118 1130 IPR008271 GO:0004672|GO:0006468
Cca07g01352 1325 CDD STKc_MAP3K-like 999 1255 - -
Cca07g01352 1325 SMART serkin_6 993 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01352 1325 SMART PB1_new 198 285 IPR000270 GO:0005515
Cca07g01352 1325 SUPERFAMILY Protein kinase-like (PK-like) 981 1255 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01352 Cca-Chr7 35130082 35142026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01352 180 435 MAP Kinase Kinase Kinase AT1G16270 43.182 3.50e-44 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Cca07g01352 PK_Tyr_Ser-Thr 5.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01352 - - gmx:100790135 2021.9