Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01341 ATGAGTTGCTTTTCATGTTTTTCATCCCATGAAAAGAAAGTAGAAAAGAGACCTAAGAATGGAAAAAGGATACAACATGGTACTCATTCTCCCAAGGAATCAGCCCAACTAACTCAGCCACGGCCAGATAATCATACTCACAAGGCAAAGGCAAACCCACAAACAGAACCTAAAATAAACAAGGAGGCAAACAAAGATAATGGTAGCCAAAACATTGCTGCCCAAACATTCACTTTTAGGGAATTGGCTGCTATCACGAAGAACTTTAGACAAGAATGCCTAATTGGTGAAGGTGGTTTTGGGAGAGTTTATAAAGGAAAACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACCGGAATGGATTACAAGGAAACAGAGAGTTTCTTGTTGAAGTCTTAATGTTGAGCCTTTTGCACCATCAAAATCTAGTGAGTCTAATTGGATATTGTGCAGATGGAGATCAAAGATTATTGGTGTATGAGTACATGTCATTGGGATCTCTTGAAGATCATTTGCTTGATCTTCATCCACAGCAAAAACCTCTAGAATGGTCTATAAGAATGAAAATAGCTTTGGATGCTGCAAAAGGCTTGGAATATTTGCATGACAAGGCTAATCCTCCAGTCATCTACCGTGACTTAAAATCTTCTAACATCTTGTTGGACAAAAATTTCAATGCAAAACTTTCTGATTTTGGACTAGCAAAGTTGGGCCCTACTGGGGACATGTCTCATGTCTCTTCAAGAGTAATGGGTACCTATGGATATTGTGCCCCTGAGTATCAAAGAACTGGTCAACTAACTGTAAAATCAGATGTATATAGTTTTGGAGTTGTTTTGCTTGAATTGATCACTGGAAGGAGAGCCATTGATAACACAAGACCAACACGGGAGCAAACTCTAGTTTCTTGGGCATATCCTGTATTCAAGGACCCTAACAAATACCAAGAATTAGCAGACCCCCTTCTTAAAGGAAATTTTCCAATAAAGTCATTGCACCAAGCAGTAGCAGTAGCAGCCATGTGCCTTAATGAAGAGCCATCAGTGAGGCCCTTGATCAGTGATGTTGTCACTGCCCTTAGTTTCCTAGGGACAAGTCCAGGGAATCAAGACCTTGCAAGAATTGAACCCGTTGTTGACATGCCCTCCCCACCACAAGAAGCCAATAGTGCCCCTTTGAATCTTCTTGATGATGATCACTATGTCACGGAACGCCAAAGGGCTGTTGCTGAAGCCATTGAATGGGGTACAAGTACAAGGAACAAAGCACCATTGCGTGAAAGTTCTACCTCTGTGTAA 1308 0.4106 MSCFSCFSSHEKKVEKRPKNGKRIQHGTHSPKESAQLTQPRPDNHTHKAKANPQTEPKINKEANKDNGSQNIAAQTFTFRELAAITKNFRQECLIGEGGFGRVYKGKLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVSLIGYCADGDQRLLVYEYMSLGSLEDHLLDLHPQQKPLEWSIRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKNFNAKLSDFGLAKLGPTGDMSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPTREQTLVSWAYPVFKDPNKYQELADPLLKGNFPIKSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTSPGNQDLARIEPVVDMPSPPQEANSAPLNLLDDDHYVTERQRAVAEAIEWGTSTRNKAPLRESSTSV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01341 435 MobiDBLite consensus disorder prediction 1 67 - -
Cca07g01341 435 SUPERFAMILY Protein kinase-like (PK-like) 75 386 IPR011009 -
Cca07g01341 435 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 425 - -
Cca07g01341 435 Gene3D Transferase(Phosphotransferase) domain 1 166 375 - -
Cca07g01341 435 Gene3D Phosphorylase Kinase; domain 1 59 165 - -
Cca07g01341 435 Pfam Protein kinase domain 91 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01341 435 PANTHER OS07G0668900 PROTEIN 2 425 - -
Cca07g01341 435 CDD STKc_IRAK 95 363 - -
Cca07g01341 435 MobiDBLite consensus disorder prediction 43 63 - -
Cca07g01341 435 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01341 435 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Cca07g01341 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Cca07g01341 435 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01341 Cca-Chr7 34737412 34742101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01341 1 423 Glycoside Hydrolase AT3G07070 68.160 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Cca07g01341 Pkinase 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01341 - - gmx:100786405 750.355