Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01337 ATGGCATTCTCAATCTCCCTCTTTGTTCTACTCATGCTTCTTTCTCTCCAATGTTCATCATCCCTTTTGTCACTGAACAAGGGTTCCTCTCTCTCAGTGGAGAAACATTCAGAAGACGTTATTCTCTCACGAAACCAAATGTTCTGTGCTGGCTTCGTTCAACTTGCTCAAAACGCTTTCTCCTTTGCCGTATGGTTCAACGAGCCTCACTCTAACAACACCAACACTGTGGTTTGGATGGCAAACCGAGAGCAACCCGTTAACGGAAAACTCTCAAAGCTTTGGCTTTTGAACAGTGGCAACCTCGTATTGCTCGATGCAGCTCAAATCACAACTTGGTCATCAAACACAGCTTCACACACCCAAGTCACGTTGCTTCTCCATGATGATGGCAATCTCGTGTTACGTGACTCCCAAGGAACCATTTTGTGGCAAAGCTTTGATTCGCCAACAGATACTCTCCTTCCGGGTCAACCTCTCACTAGATTCACACAACTTGTGTCTTCAAGAAGTGAGACTAACCATTCTTCTGGCTTCTATAAGCTTCGCTTCGACGATGACAACGTTCTTCGTCTTATTTACGATGGTCCTTATGTTTCAAGCCAGTATTGGCCACAACCTTGGTTACTGAGTTGGGAAGCTGGGAGGTTTAACTACAATAGCACCAGAATCGCAGTGTTAGATTCTCTCGGAAATTTCACTTCTTCGGATAATTATGGTTTTTCCACGAATGATTATGGCTTGGGGGTACCAAGAAGATTGAAACTGGATTGTGATGGTAACGTTCGTGTGTACAGTAGAAATGACAAATCAAAGCAATGGTACGTTTCAAGGCAAGTGATATTTGATGCTTGTTCCATTCATGGGATTTGTGGTGCTAACAGTACTTGCGATTATGATCATGAAAGAGGAAGGAGGTGTTCGTGTTTACCAGGGTACAGAGTGAAGAATCATAGTGATTGGTCTTATGGGTGTGAACCAATGTTTGATCTTTCTTGCAATAGAAATGAGTCTACCTTTTCGGAGATCCGGGGTGTTGAGTTTTACGGTTATGACAGTCATTATGCCCCAAACACTACCTTCACGGGTTGTGTGAATTTATGTTTGGAAGATTGTAACTGCATAGGGTTTCAGTACAGATATGATGGAGACAAAGGGTTCTCTGTCTGCTATACGAAGTTACAGTTTCTTAATGGGAGGAGTTCGCCAAGTTATACGGGTTCAATTTACGTGAGACTTGCAAATAGTAATAACGACTCCAGAGATGAATCTGCGACTGTGGGTGCATATGATCATTTTTGTTCCGTGGAATCCGTGCAGCTTCATAGAGACTATGTGAGAAAGGTGGAAAATCGCTTGGTGAGGTTTTTTCTGTGGCTTGCTACTGCAGTTGGAGGTTTAGAACTCGTTGGCTTTTTGATGATTTGGGGTTTCTTGATTAGGACGCGTCAAAAGTCTGGTGCGGATCAACAAGGGTACCATCTTGCAGAAGTGGCATTCAGAAAATATAGTTATTCTGAGTTGAAGGAGGCAACAAAGGGGTTCAGTGAAGAGATTGGAAGGGGTGGAGGAGGGGTTGTGTACAAAGGCATTTTATCAGATCAAAGACATGCTgcaatcaagagactctatgaagctaaacaaggagaaggggaattccttgctgaagttgatgtttacagctatggaattgttctcttggagatgataactggaaaaagCCCAACAATGGATATTGAAACAGTTGATGGAACAGAGGCACACAATGGGAGGCTGGTAACATGGGTGAGAGGGAAACAGAGGAGAAATTCTTGGGTGGAGGAAATCATGGATCCTACAATTGGGACATATTATGACGTGAATAAGATGGAAATTTTGGCAACAGTTGCGTTGGATTGTGTAGAGGAAGACAAAGATGTAAGGCCCACCATGAAGCAAGTGGTTGAGTTCCTCCAAAGCCAAGAAAGTTGA 1971 0.4099 MAFSISLFVLLMLLSLQCSSSLLSLNKGSSLSVEKHSEDVILSRNQMFCAGFVQLAQNAFSFAVWFNEPHSNNTNTVVWMANREQPVNGKLSKLWLLNSGNLVLLDAAQITTWSSNTASHTQVTLLLHDDGNLVLRDSQGTILWQSFDSPTDTLLPGQPLTRFTQLVSSRSETNHSSGFYKLRFDDDNVLRLIYDGPYVSSQYWPQPWLLSWEAGRFNYNSTRIAVLDSLGNFTSSDNYGFSTNDYGLGVPRRLKLDCDGNVRVYSRNDKSKQWYVSRQVIFDACSIHGICGANSTCDYDHERGRRCSCLPGYRVKNHSDWSYGCEPMFDLSCNRNESTFSEIRGVEFYGYDSHYAPNTTFTGCVNLCLEDCNCIGFQYRYDGDKGFSVCYTKLQFLNGRSSPSYTGSIYVRLANSNNDSRDESATVGAYDHFCSVESVQLHRDYVRKVENRLVRFFLWLATAVGGLELVGFLMIWGFLIRTRQKSGADQQGYHLAEVAFRKYSYSELKEATKGFSEEIGRGGGGVVYKGILSDQRHAAIKRLYEAKQGEGEFLAEVDVYSYGIVLLEMITGKSPTMDIETVDGTEAHNGRLVTWVRGKQRRNSWVEEIMDPTIGTYYDVNKMEILATVALDCVEEDKDVRPTMKQVVEFLQSQES 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01337 656 CDD EGF 285 318 - -
Cca07g01337 656 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Cca07g01337 656 Gene3D Phosphorylase Kinase; domain 1 479 558 - -
Cca07g01337 656 Pfam S-locus glycoprotein domain 241 316 IPR000858 GO:0048544
Cca07g01337 656 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 205 IPR036426 -
Cca07g01337 656 CDD PAN_AP_plant 329 414 - -
Cca07g01337 656 Gene3D Transferase(Phosphotransferase) domain 1 559 656 - -
Cca07g01337 656 SMART blect_4 32 150 IPR001480 -
Cca07g01337 656 Gene3D - 149 277 IPR036426 -
Cca07g01337 656 SUPERFAMILY Protein kinase-like (PK-like) 555 652 IPR011009 -
Cca07g01337 656 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 557 - -
Cca07g01337 656 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 557 655 - -
Cca07g01337 656 Pfam D-mannose binding lectin 76 162 IPR001480 -
Cca07g01337 656 ProSiteProfiles EGF-like domain profile. 281 319 IPR000742 -
Cca07g01337 656 CDD B_lectin 41 150 IPR001480 -
Cca07g01337 656 SUPERFAMILY Protein kinase-like (PK-like) 493 557 IPR011009 -
Cca07g01337 656 Gene3D - 23 148 IPR036426 -
Cca07g01337 656 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Cca07g01337 656 ProSiteProfiles Bulb-type lectin domain profile. 16 148 IPR001480 -
Cca07g01337 656 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 557 - -
Cca07g01337 656 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 557 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01337 Cca-Chr7 34591060 34593438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01337 551 651 Receptor kinase-like Gene Family AT3G58690 37.624 2.76e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca07g01337 S_locus_glycop 3.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01337 - - gmx:100784287 830.476