Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01336 ATGAGACTAGTTTTGTCAACCACACTCTTTCTTGTATCATCCTTATTCTCTTCGCAATGTTCATCATCTTCTTCGTCACTCAGAAAGGGCTCTTCCCTCTCAGTGGAAAATCCACAAGACGTTCTCATCTCACCAAACCGCACCTTCTCCGCAGGCTTCGTTGGCATCGGCGAAAACGCATATTCCTTCGCAATATGGTTCACGGAGCCTCACTTCCACGCCCCCAACACCGCCACGTGGATCGCAAACCGTGACCACCCCGTTAACGGGAAACGCTCCAAACTTTCCCTCACACACTCCGGTAACGTAGTCTTGGTGGATGCTTCTTTCAACACCGTTTGGTCTTCAAACACCGTTTCTTTCGCCCCATCAGAGTTGCATCTCGGAGATGATGGCAACCTCGTGTTGCATGACTCGAGAGGAACCATTCTGTGGCAAAGTTTTGATTTTCCAACGGATACTCTTCTTCCGGGTCAACCTCTCACTAGACACACGCAGCTTGTGTCTTCGAGAAGCGAGAGTAATCACTCCTCGGGGTTCTATAAGCTCTTGTTTGATGATGAAAACGTTCTTAGTCTTCACTATGATGGTCCTTCTGTTTCAAGCTCTTACTGGCCAAAGCCTTGGTTGCTGAGTTGGGATGTTGGTAGGACTTATTTCAATAGTAGCAAGATTGCAGCGTTTGATTCTCTTGGCCTTTTCAACTCTTCGGATAACTTCACTTTTGTGACATCTGACTATGGCGCGGTGCTGCAAAGAAGGTTGAAACTGGATTGTGATGGGAATGTGAGAGTGTATAGTCGAATGAGTGTGTTGGAGAAATGGTATGTTTCGTGGCAAGGGATTTCTAATGGTTGCTTGGTTCATGGGATTTGTGGAGCCTATAGTACATGTGGCTATGATCCTATGATTGGGAAAACATGTTTGTGTCTTCCGGGGCATAGGTTGAACAATTTCAGTGATTGGTCTTATGGGTGTGAACCCATGTTTGATCTCACTTGTGATGGGAATGAGTCTAGCTTCTTGGAGATGCGCGGTGTTGAGCTTTATGGCTATGATAATCACTATGTGGAAGTGAGTAATTATAGTTCTTGTGAGAGTTTGTGCTTGCGAGATTGCACATGCAAGGGGTTTCAGTACTCCTATAGCGATAAAAAAGGCTTTTTCAGGTGCTATACAAAGACACAACTGCTCAATGGACGGCGTTCCCCGAAATTCACAGGATCAACATACTTGAGATTGCCTAAAAATAGTAGCTTCTCTGTCAAACAATCTGCTGTTGAAACTGTTCATGATCATGTTTGTTCGGTTCAACTTCGAAGAGATTATATCAAAGCACGTGTAAGCCATGTTGCGACGGTTTTCCAGTGGTTTGCTACGGCATTTGGAGCATTGGAAATGGTTAGCATTTTTGTGGTTTGGTTCTTAATTAGGACCAACCAAAGGACTAATGCGGATCTGCAGGGCTACTATCTTGCAGCAACAGGTTTCAGAAAATTTAGTTACTCTGAGCTGAAAAAGGCTACAAAGGGGTTCAGGTATGAGATTGGAAGAGGTGCAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATCAAAGAAATGCAgcaataaagagactctacaatgctaaacaaggagaaggggaatttcttgctgaagtaggcatcattgggaggcttaaccacatgaacttgattgaaatgtgggggtattgtgctgagggaaagcataggttgttggtgtatgagtacatggagaatggttctttggctcaaaatcttgcatccaacacacttgattggagcaagagatataaaattgctcttggtatggcaagagttcttgcatatttacatgaggaatgcttggagtggattttgcactgtgatataaagccacaaaacatactcctagattccaattatcagcccaagttagcagactttggcttgtctaagctcctcaacagaaacaaccccaacaatccaagcatctctatgatcagaggcaccagaggatatatggcacctgagtgggttttcaacttggctatcacatccaaggtggatgtttatagctatggaattgttgttttggaaatgataactgggaaaagTCCAACCACAAGTGTCCAAAACATTGATGGTGAAGAGACATATGATGGGAGATTGGTTGCATGGGTGAGAGAAAAAAGTAGCAACACCAATGCATCTTGGGTAGAGCAAATAATTGATCCTGCTGTTGGACCACATTATGATAGCATTAAGATGGAAATTTTGATCAGAGTAGCTTTGAACTGTGTGCTGGAAGACAAAGATTCAAGACCCACCATGAGACAAGTAGTTGAGGTGCTTCAATGTCATGGAAGTGATCATTAG 2379 0.3464 MRLVLSTTLFLVSSLFSSQCSSSSSSLRKGSSLSVENPQDVLISPNRTFSAGFVGIGENAYSFAIWFTEPHFHAPNTATWIANRDHPVNGKRSKLSLTHSGNVVLVDASFNTVWSSNTVSFAPSELHLGDDGNLVLHDSRGTILWQSFDFPTDTLLPGQPLTRHTQLVSSRSESNHSSGFYKLLFDDENVLSLHYDGPSVSSSYWPKPWLLSWDVGRTYFNSSKIAAFDSLGLFNSSDNFTFVTSDYGAVLQRRLKLDCDGNVRVYSRMSVLEKWYVSWQGISNGCLVHGICGAYSTCGYDPMIGKTCLCLPGHRLNNFSDWSYGCEPMFDLTCDGNESSFLEMRGVELYGYDNHYVEVSNYSSCESLCLRDCTCKGFQYSYSDKKGFFRCYTKTQLLNGRRSPKFTGSTYLRLPKNSSFSVKQSAVETVHDHVCSVQLRRDYIKARVSHVATVFQWFATAFGALEMVSIFVVWFLIRTNQRTNADLQGYYLAATGFRKFSYSELKKATKGFRYEIGRGAGGVVYKGILSDQRNAAIKRLYNAKQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLASNTLDWSKRYKIALGMARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKLADFGLSKLLNRNNPNNPSISMIRGTRGYMAPEWVFNLAITSKVDVYSYGIVVLEMITGKSPTTSVQNIDGEETYDGRLVAWVREKSSNTNASWVEQIIDPAVGPHYDSIKMEILIRVALNCVLEDKDSRPTMRQVVEVLQCHGSDH 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01336 792 Gene3D - 18 150 IPR036426 -
Cca07g01336 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 791 - -
Cca07g01336 792 SMART ntp_6 336 414 IPR003609 -
Cca07g01336 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Cca07g01336 792 Pfam Protein kinase domain 515 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01336 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 168 IPR036426 -
Cca07g01336 792 SMART blect_4 32 151 IPR001480 -
Cca07g01336 792 SUPERFAMILY Protein kinase-like (PK-like) 488 785 IPR011009 -
Cca07g01336 792 Pfam PAN-like domain 334 396 IPR003609 -
Cca07g01336 792 Gene3D Transferase(Phosphotransferase) domain 1 585 791 - -
Cca07g01336 792 SMART serkin_6 510 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01336 792 Gene3D Phosphorylase Kinase; domain 1 476 584 - -
Cca07g01336 792 CDD PAN_AP_plant 330 415 - -
Cca07g01336 792 Pfam S-locus glycoprotein domain 237 315 IPR000858 GO:0048544
Cca07g01336 792 CDD STKc_IRAK 516 786 - -
Cca07g01336 792 ProSiteProfiles Protein kinase domain profile. 510 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01336 792 CDD B_lectin 42 151 IPR001480 -
Cca07g01336 792 PIRSF SRK 1 791 IPR024171 GO:0004674
Cca07g01336 792 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 791 - -
Cca07g01336 792 ProSiteProfiles PAN/Apple domain profile. 334 418 IPR003609 -
Cca07g01336 792 Gene3D Hepatocyte Growth Factor 343 413 - -
Cca07g01336 792 Pfam D-mannose binding lectin 77 165 IPR001480 -
Cca07g01336 792 ProSiteProfiles Bulb-type lectin domain profile. 18 149 IPR001480 -
Cca07g01336 792 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Cca07g01336 792 SUPERFAMILY Hairpin loop containing domain-like 335 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01336 Cca-Chr7 34535017 34537785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01336 500 785 Trihelix Transcription Factor Family AT5G38560 40.614 7.37e-62 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca07g01336 Pkinase 5.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01336 - - gmx:100783758 1278.08