Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01329 ATGATAAGAGGAACAAGAGGGTACATGGCACCTGAGTGGGTTTACAATTTACCAATAACCTCAAAGGTTGATGTTTACAGCTATGGAATTGTTCTCTTGGAGATGATAACTGGAAAAAGCCCAACAATGGATATTGAAACAGTTGATGGAACAGAGGCACACAATGGGAGGCTGGTAACATGGGTGAGAGGGAAACAGAGGAGAAATTCTTGGGTGGAGGAAATCATGGATCCTACAATTGGGACATATTATGACGTGAATAAGATGGAAATTTTGGCAACAGTTGCGTTGGATTGTGTAGAGGAAGACAAAGATGTAAGGCCCACCATGAAGCAAGTGGTTGAGTTCCTCCAAAGCCAAGAAAGTTGA 369 0.4228 MIRGTRGYMAPEWVYNLPITSKVDVYSYGIVLLEMITGKSPTMDIETVDGTEAHNGRLVTWVRGKQRRNSWVEEIMDPTIGTYYDVNKMEILATVALDCVEEDKDVRPTMKQVVEFLQSQES 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01329 122 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 121 - -
Cca07g01329 122 Pfam Protein kinase domain 3 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01329 122 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01329 122 SUPERFAMILY Protein kinase-like (PK-like) 2 118 IPR011009 -
Cca07g01329 122 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Cca07g01329 122 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01329 Cca-Chr7 34406320 34406688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01329 2 117 Receptor kinase-like Gene Family AT3G58690 39.655 8.73e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca07g01329 Pkinase 3.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01329 - - ccaj:109812862 250.751