Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01323 ATGGTAGTAGCTAAAATTACAAATTTGGTAATGGAAGGTTTTAAAGCAATTGAAGGGGCTGTTAACGAAGTCTCTAAGAATATTCAAAATGGGGCAGAGGGGAATATCCATAATGATATGGTGAGCCCTATGAGGGAGGTAGGCGATGATCACTTTGTGACATTGGATGATGGTGATGGTTTGATTAGTAAAGGGAGTAGGGTGGGTAGTAAAAAGAAAGGAGTGTTTAGAAAAGGGGGTCGTGTGAAGGGTGATGAGGGAGGGGTGCGAACAGAGGTGGAAATGGAGGTTCCAAATGTGGTGACTACTGATGGTGTTGATCCAGATGAAGTGGAGAGGTGTATTGAGCCTAGGGAGGGGGTGGTGTCAATAGACTCCCTTCAAGCCAAAAGTGATGAGCCTATTGTCAGAAATAATATGAGAAGTGTACTAAAAAAAGCTAGAAAGAAAAAGCAAAATAAAGGAGCTTCCCAAGATTCAGTGTCAATGTCGGAAGATTTCGTGTCTACAATGACTGTTGTAGAGGGTGGGACCTCAACAGTGGTCCCGTCGATTGAGACTAAAGGTGTCAATTCAGGTGCAGAGTTAGAACGGTGTTGTGATGAAGCCATGGCTGATCGTATTCTCTCTATCTGCAAGAGTATTGGAATGGAGGTGCGTGGGAATGAAGAGGAGGTGCGACAGAAACTTATTTCATTAGAGTTGAGGGATCGGGGTAATGTGAAAAGGCGTCGTATATCTAAGCTTATTCGAGCTGAGGAGCTAGATTTTATTGCGATACAGGAGTCTAAATTGGAGAGTTATGATCGTGCTTTTTGTGCTCACTTATGGGGATCTACAGAGTTTGAGTGGTTTGCTTCTCCTTCTCAAGGTAGGAGTGGCAGTCTACTTTCTATTTGGAACTCCAACCGAGTTGGGGATTTCAACACGGTGAGAAGACAAGATGAGAGAAAAGGGGTGATTGGTGAATACGGTGTACGAGATATGGAGGAATTCAATTTGATTATAAGAGATATGGAGTTGATTGATTTACCACTAGTTGGGAAGCGATTTACTTGGTTTAAAAGTGATGGTTCTATGATGAAAGTGGACGTCGAAGTGTTTGGTAATGTGGATACCAAGATAAAAAGTCTAACCAAGGAATTAAAGGAGCTGGATGCGAAGAATGAGGATTACTTTCTTGTAGAATCAGAAAGGATTAGGCAAAAGGAGCTAGTGGATGCTATTTGGTGTGCTCGGAGGAACAAACTAAGCTTGTTATCTCAAAAGGCGCGAGTTCGTTGTGGTGAGCAAATGGTAGAGGAGATTTATGAGATGAAAGAGGTTGTGAGGTCATATTTTGAGGAGCATTTCAAAGCTAGAAGTTGGCTTAGACCACGATTGTCAGTTGTTGGTTTTCCTGTGTTGTCTAATGCACAAAATGCAAGATTGGTTGGTGACTTTACTGAGGAGGAAAAGAGACAACATTCTATTGCTCTCCTTAGACAAATGGGTGGGGAGCCTAAGGTATATACTTTGGAACAAGTATCTGAGCACAACAACTCCAAAGATTGCTGGCTTATTATTAATGGCAAGGTTTATAATGTCACAAAGTTCTTAGATGACCATCCTGGTGGAGATGATGTCTTGGTGGCTTCCACAGGGAAAGATGCCACCGATGACTTTGAGGATGTTGGTCACAGTAACAGTGCTAGAGCCATGTTGGATGGCTTTTATGTTGGAGACATTGATCCAGCAACCGTTCCATCTACTCGGGTTCAGAACACTCTTCCAACACAACCTCAAAACACTCAGAACAAGACATCATCAAACTTCATGATCAAGATGCTCCAGTTTCTACTTCCCCTTGTTATCTTGGGTGTTGCGGTTGGTGTTCGTTTCTACAACACCAAATCAACATAG 1902 0.4248 MVVAKITNLVMEGFKAIEGAVNEVSKNIQNGAEGNIHNDMVSPMREVGDDHFVTLDDGDGLISKGSRVGSKKKGVFRKGGRVKGDEGGVRTEVEMEVPNVVTTDGVDPDEVERCIEPREGVVSIDSLQAKSDEPIVRNNMRSVLKKARKKKQNKGASQDSVSMSEDFVSTMTVVEGGTSTVVPSIETKGVNSGAELERCCDEAMADRILSICKSIGMEVRGNEEEVRQKLISLELRDRGNVKRRRISKLIRAEELDFIAIQESKLESYDRAFCAHLWGSTEFEWFASPSQGRSGSLLSIWNSNRVGDFNTVRRQDERKGVIGEYGVRDMEEFNLIIRDMELIDLPLVGKRFTWFKSDGSMMKVDVEVFGNVDTKIKSLTKELKELDAKNEDYFLVESERIRQKELVDAIWCARRNKLSLLSQKARVRCGEQMVEEIYEMKEVVRSYFEEHFKARSWLRPRLSVVGFPVLSNAQNARLVGDFTEEEKRQHSIALLRQMGGEPKVYTLEQVSEHNNSKDCWLIINGKVYNVTKFLDDHPGGDDVLVASTGKDATDDFEDVGHSNSARAMLDGFYVGDIDPATVPSTRVQNTLPTQPQNTQNKTSSNFMIKMLQFLLPLVILGVAVGVRFYNTKST 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01323 633 Coils Coil 375 395 - -
Cca07g01323 633 Gene3D - 499 580 IPR036400 -
Cca07g01323 633 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 501 577 IPR001199 -
Cca07g01323 633 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 499 582 IPR036400 -
Cca07g01323 633 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 532 539 IPR018506 GO:0020037
Cca07g01323 633 PANTHER CYTOCHROME B5 497 630 - -
Cca07g01323 633 SMART Cyt_b5_2 504 577 IPR001199 -
Cca07g01323 633 SUPERFAMILY DNase I-like 240 358 IPR036691 -
Cca07g01323 633 PRINTS Cytochrome B5 signature 551 558 IPR001199 -
Cca07g01323 633 PRINTS Cytochrome B5 signature 526 536 IPR001199 -
Cca07g01323 633 PRINTS Cytochrome B5 signature 536 550 IPR001199 -
Cca07g01323 633 PRINTS Cytochrome B5 signature 564 576 IPR001199 -
Cca07g01323 633 Pfam Cytochrome b5-like Heme/Steroid binding domain 505 576 IPR001199 -
Cca07g01323 633 PANTHER CYTOCHROME B5 497 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01323 Cca-Chr7 34261682 34270842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01323 497 628 NADPH P450 reductases AT5G48810 64.179 3.22e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01323 K23490 - gmx:100798640 216.853