Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01318 ATGGATAGCGATGAATTTGAGAGCTTTGAAATGAGAGTTGATGCAATAACAAGTTATAGTTGGAGAGTAGATAGTATGATAAGGAGTGAGACTGCGTCAAATTTGGGAGAATCCCCTCTTCCTAGTTTTGATTCCCGAGTTGACAGAGCCATAAGGAGTAGGACTCCATCGTCAATGTCAAATTTTGAATCATCCCCTCTCCATACTTTTCCACGATTATTCACCCTGCGTGAGCTTAAAGAAGCCACCAACAATTTCTCAGTTGGGAACAAGATTGGTGTTGGAAGCTTTGGTGATGTCTACAGAGGCAAACTCTTTGATGGTGGTGAGGTGGCAATCAAAAGTGATGGTTTCTGGTCAAAGGGTCTAAATAACTCTGAATTGGCCAGCTGGTCCCGTCTACCACCCCACAAGCACTTGGTTGGGGTAGTTGGGCTCTGTCAAGAGAATGGTGAGAGGTTCTTGGTGTATGAGTACATGAAGAATGCGTCCTTGTATGATCAATTGCATGACAAGCATAGCAGTGTGTTTAATTCGTGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCCCGGGGAATACAACATGTTCAAAACTATGCGGTTCCATATGTTCACAGAGGAGTAATGAAGTCTTCCAACATTCTTCGTGctcacccctga 663 0.4238 MDSDEFESFEMRVDAITSYSWRVDSMIRSETASNLGESPLPSFDSRVDRAIRSRTPSSMSNFESSPLHTFPRLFTLRELKEATNNFSVGNKIGVGSFGDVYRGKLFDGGEVAIKSDGFWSKGLNNSELASWSRLPPHKHLVGVVGLCQENGERFLVYEYMKNASLYDQLHDKHSSVFNSWKMRIKIALDASRGIQHVQNYAVPYVHRGVMKSSNILRAHP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01318 220 Pfam Protein tyrosine and serine/threonine kinase 88 216 IPR001245 GO:0004672|GO:0006468
Cca07g01318 220 Gene3D Transferase(Phosphotransferase) domain 1 68 219 - -
Cca07g01318 220 ProSiteProfiles Protein kinase domain profile. 86 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01318 220 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 72 216 - -
Cca07g01318 220 SUPERFAMILY Protein kinase-like (PK-like) 58 217 IPR011009 -
Cca07g01318 220 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 72 216 IPR044815 GO:0004674
Cca07g01318 220 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01318 Cca-Chr7 34023447 34024109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01318 74 216 Receptor kinase-like Gene Family AT3G55950 58.599 2.23e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Cca07g01318 PK_Tyr_Ser-Thr 4.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01318 - - ccaj:109793404 448.358