Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01303 ATGATGTCTTTCAGCAACGATGCAAAATTGTTCTTTGTTTTGTTCATACTCTGTTGTTATGTGTTGAAAGTTGGTATTGCCATGGACAGCATCACCTCATCGCAATCCATGAAGGACCCTGATATACTAAGTTCCAAAGATGGTAACTTCACGTTGGGATTCTTCACCCCTCAAAACTCCACAAACCGCTACGTTGGAATTTGGTGGAAGTCTGAGTCCACAGGCATAAGGGTTGCTAACAGAAACCAACCATTGAAAGATTCTTCTGGAGTTGTTACCATTTCTGAAGATGGCAATCTTGTGGTGCTCAATGGACAGAAACAAGTCATTTGGTCAACAAATGTGTCCAATTCATCAACCAATACAAGTTCAGAGTTTTCAGACTCGGGTAAGCTTGTACTCATGGAAACCACAATGGGAAAGATCTTGTGGGATAGTTTTCAGCAACCTTCAAATGCATTATTGCCTGGATTGAAACTTTCAAGCAACAGAACAGGTACGAAAGTAGAACTTACATCATGGAAAAGCCCTTCTAATCCCTCTGTTGGGAGTTTCTCTTCCAGTATTGTTCAACGCATAAATATAGTTGAAATGTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCATGGAATGGTGGATTCTTTGTAGGGATACCGACTGTGATTCCAGATTTTCCGGAAGGGTCCCCTGTTACTCAAGACATATGCAGAAGCCAGTGCTTGAAGAATTGTCCTTGTGTTGCATATTCTCACGAGGATGGCATTGGTTGTATGTCTTGGACTGAGAATCTACTTGACATACAACAATTCTCAACCGGAGGACTTGATCTATATGTTCGTGTGGCCCATTCTGAACTTGGTAAAGGAAAAAATACAACAATCATTATTACAATTACAGTCATAATAGGAACTGTCATCATTGTTACTTGTGCCTTTGTCATGTGGAGGATTTCCAATCACCCGGCTAAATTATGGCACTTAATTAAATCAGAAAGGAACAGGAACAACGAGGCTATCCAACAATTTAATAATGGTGAATCATCAGAACATCCAATCCACTCAGTCATTGAAGAACTGTCACAAGTTAAACTCCAGGACATGTTACTGTTTGATTTCGAAAGAGTTGCAAGAGCAACAAACAACTTCCACCTGTCGAACAAACTTGGGCAGGGTGGTTTTGGTCCTGTGTACAAGGGGAAACTGCAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCCAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTATTTGGCTGCTGTGTTGAAGGTGATGAAAAGATGTTGATATATGAATACATGCCAAATAAAAGTTTGGATGTGTTTATCTTTGATCCATCAAAAAGAAAACTCCTGGATTGGAGGAAGCGTTGTAGCATAATAGAAGGAATAGCTCGAGGTTTGCTTTATCTTCACCGAGACTCTAGACTAAGAATCATACATAGAGATTTGAAGACAAGCAATATCTTATTAGATGAAGAGTTAAATCCAAAAATATCTGACTTTGGTATGGCCAGAATCTTTGGAAGGAGTGAAGATCAAGCCAATACTAACAGGGTTGTGGGAACTTACGGCTATATGTCCCCTGAATATGCTATGCAAGGATTATTTTCAGAAAAATCAGATGTGTTTAGTTTTGGTGTTTTGGTACTAGAGATTGTTAGTGGAAGAAGAAACTCTAGCTTTTATGAAGATGAGCATGCTCTTAGCCTTTTAGGATTTGCCTGGATACAATGGAGGGAAGGCAATACATTATCTTTAATAGATCAAGAAATTTATGATCCTGGTCATCATAATGATATTTTAAGGTGCATACACATAGGACTTCTTTGTGTACAAGAACTCGCTATAGTGAGGCCCAGTATGGCTGCAGTAATTTCTATGCTTAACAGGGATGCTGCATTACTTCCTCTTCCAAGTGAACCTGCATTCATTCTGCGGCAAAATATGTTGAATTCGGCGTCATCTAAAGGAACTCATAGTTCTTACTCTGTCAACACTATTAGTACTACGGATATTTGTGGTAGATAG 2112 0.3949 MMSFSNDAKLFFVLFILCCYVLKVGIAMDSITSSQSMKDPDILSSKDGNFTLGFFTPQNSTNRYVGIWWKSESTGIRVANRNQPLKDSSGVVTISEDGNLVVLNGQKQVIWSTNVSNSSTNTSSEFSDSGKLVLMETTMGKILWDSFQQPSNALLPGLKLSSNRTGTKVELTSWKSPSNPSVGSFSSSIVQRINIVEMFIWNETRPYWRSGPWNGGFFVGIPTVIPDFPEGSPVTQDICRSQCLKNCPCVAYSHEDGIGCMSWTENLLDIQQFSTGGLDLYVRVAHSELGKGKNTTIIITITVIIGTVIIVTCAFVMWRISNHPAKLWHLIKSERNRNNEAIQQFNNGESSEHPIHSVIEELSQVKLQDMLLFDFERVARATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLFGCCVEGDEKMLIYEYMPNKSLDVFIFDPSKRKLLDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEELNPKISDFGMARIFGRSEDQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRNSSFYEDEHALSLLGFAWIQWREGNTLSLIDQEIYDPGHHNDILRCIHIGLLCVQELAIVRPSMAAVISMLNRDAALLPLPSEPAFILRQNMLNSASSKGTHSSYSVNTISTTDICGR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01303 703 Pfam PAN-like domain 226 270 IPR003609 -
Cca07g01303 703 CDD B_lectin 43 150 IPR001480 -
Cca07g01303 703 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Cca07g01303 703 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 22 222 - -
Cca07g01303 703 SMART serkin_6 385 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01303 703 Gene3D Phosphorylase Kinase; domain 1 359 460 - -
Cca07g01303 703 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 224 700 - -
Cca07g01303 703 Pfam Protein tyrosine and serine/threonine kinase 386 587 IPR001245 GO:0004672|GO:0006468
Cca07g01303 703 Pfam D-mannose binding lectin 76 175 IPR001480 -
Cca07g01303 703 PIRSF SRK 223 703 IPR024171 GO:0004674
Cca07g01303 703 PIRSF SRK 1 228 IPR024171 GO:0004674
Cca07g01303 703 SMART ntp_6 213 284 IPR003609 -
Cca07g01303 703 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 222 - -
Cca07g01303 703 SUPERFAMILY Protein kinase-like (PK-like) 370 692 IPR011009 -
Cca07g01303 703 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 215 IPR036426 -
Cca07g01303 703 ProSiteProfiles Protein kinase domain profile. 385 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01303 703 SMART blect_4 34 150 IPR001480 -
Cca07g01303 703 Gene3D Transferase(Phosphotransferase) domain 1 461 662 - -
Cca07g01303 703 Gene3D - 23 148 IPR036426 -
Cca07g01303 703 CDD STKc_IRAK 391 658 - -
Cca07g01303 703 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 224 700 - -
Cca07g01303 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Cca07g01303 703 CDD PAN_AP_plant 218 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01303 Cca-Chr7 33594707 33598211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01303 287 674 Receptor kinase-like Gene Family AT4G05200 50.769 3.47e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca07g01303 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01303 - - gmx:100779455 779.63