Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01292 ATGGGTTTCAGACACCATGGAAACTTGTTCTTTGTTCTGTTCATATTCTGTAGTTATGAGTTTGACATTGCTATTGCTGCAGACAACATCACATCATCTCAATCTATGAAGGACCCAGAAACTCTAAGTTCCAAAGATGGTAACTTCACGTTGGGATTCTTCACCCCTCAAAACTCCACAAACCGCTACGTTGGAATTTGGTGGAAGTCTGAATCCACAGTCATATGGGTTGCTAACAGAAACCAATCACTGAATGACTCTTCTGGAGTTGTCACAATTTCTGAAGATGGCAATCTTGTGGTGCTCAATGGACAGAAACAACTTTGGACAACGAATGTGTCCAACATAACATCCAACACAAGTTCCCAGTTTTCAGACTCTGGTAAGCTCGTTCTCACAGACTCCACAAGGGGAACCATCTTATGGGATAGTTTTCAGCAACCTTCAAATACATTATTGCCAGGTATGAAACTTCTAAGCAATAGAACAGGTATGGAACTAAAACTTACATCATGGAGAAGCCCCTCTAATCCCTCCATTGGGAGCTTCTCTCTCGGTATTGTTCAACGCAAAACTATAGTTGAAGCCTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCATGGAATGGTGGGGTCTTTACAGGGACAAGAAACATGGCAGGTGCGTATCTGAATGGTTTTCAAGTTGTAGATGATGACGAAGGAGGTAAAGAGGTCTATTATAGTGTACCAAGTGCAACAGGATttgtagtctatatattgaattcgcaaggccaatttgaacaaacatggtgggatgatgagaagaaagaaatggaagttacgtggagtagtgaacaatcggattgtgatgtttatggtatatgtgggcctaatgcaatctgtaattcagaaaaatcaccgatatgcagctgtttggaagggtttgaggaaagaaacaaagaggaatggaatagacagaactggactagtggatgtgttaggaagagagatctgaagtgtgaaagggtcaaagaacaaaacacaagtacagatacaaaggaagatgaatttttGAAACTGCAAATGGTTAAAGTTCCAGATTTTGCACAAGGGTCAACTGTTACACAAGACATATGCAGAAGCCAGTGCTTGGAGAATTGCTCTTGTATGGCGTATTCTCATCATGATGGGATTGGTTGTATGTCTTGGACAGAGGATCTACTGGACATGCAACAATTCTCAAGTGAAGGACTTGATCTATATTTTCGTGTAGCCCATTCTGAACTTGATAAAGGGAGAAAAACAACAATCATCATTATAATTACAGTGATTATAGGAACTGTCATCCTTGTTGCCTGTGCATATGCCACGTGGAGGATTTCCAATCACCCAGTTAAAATATGGCTACCAATTAAGTCAGCAATGAAAAGGAGCAACAAAACTTCCCTACCTTTAAACAAGGGTGTACCGTCAGAAGATCCGAGCCACAAAGTAATTGAAGAACTGTCACTAGTTAAACTGCAGGAAATGTTACTACTTGATTTCGAAAGGCTTGCAACAGCCACTAACAACTTCCATTTGTCCAACAAACTTGGGCAGGGTGGGTTTGGTCCGGTTTACAAGGGGAAATTGCAAGATGGACAAGAAATAGCAATTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTTTTGGCTGCTGTGTTGAAGGTGATGAAAAGATGTTGATATATGAATACATGCCAAACAAAAGTTTGGATGTGTTTATCTTTGATCCATCAAAAAGCAAACTCCTAGATTGGAGGAAGCGTTGTAGCATAATAGAAGGAATTGCTCGTGGATTGCTTTATCTTCATAGAGATTCCAGACTAAGAATCATACATAGAGATTTGAAGACAAGTAATATCTTATTAGATCAAGAGTTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATTTTTGGAGGGAATGAAGATCAAGCCAACACTAACAGAATTGTTGGAACCTATGGCTATATGTCTCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGGTACTAGAGATAGTTAGTGGAAGAAAAAACACAAGCTTTTATGATGATGAGCATGCTCTTAGTCTCTTAGGATTTGTCTGGATACAATGGAACGAAGGCAACATATTATCTTTAATAGATCCAGGAATGTATGATCCTAATCATCATAAAGATATTTTAAGGTGCATACACATAGGACTACTATGTGTACAAGAACATGCTATAGAGAGGCCCACTATGTCTGCAGTAATTTCTATGCTTAACAGTGAGGTTGCCTTTCTTCCTCCTCCAAGTCAACCTGCATTCATCCAGAGGCAAACTATGTTGAATTCGGTATCATCTAAAGAGCGTTATAGTTCTTCCTCGGTCAATAGTGTTAGTATTACAAATGTTAGTGGTAGATAG 2523 0.3472 MGFRHHGNLFFVLFIFCSYEFDIAIAADNITSSQSMKDPETLSSKDGNFTLGFFTPQNSTNRYVGIWWKSESTVIWVANRNQSLNDSSGVVTISEDGNLVVLNGQKQLWTTNVSNITSNTSSQFSDSGKLVLTDSTRGTILWDSFQQPSNTLLPGMKLLSNRTGMELKLTSWRSPSNPSIGSFSLGIVQRKTIVEAFIWNETRPYWRSGPWNGGVFTGTRNMAGAYLNGFQVVDDDEGGKEVYYSVPSATGFVVYILNSQGQFEQTWWDDEKKEMEVTWSSEQSDCDVYGICGPNAICNSEKSPICSCLEGFEERNKEEWNRQNWTSGCVRKRDLKCERVKEQNTSTDTKEDEFLKLQMVKVPDFAQGSTVTQDICRSQCLENCSCMAYSHHDGIGCMSWTEDLLDMQQFSSEGLDLYFRVAHSELDKGRKTTIIIIITVIIGTVILVACAYATWRISNHPVKIWLPIKSAMKRSNKTSLPLNKGVPSEDPSHKVIEELSLVKLQEMLLLDFERLATATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAIKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLFGCCVEGDEKMLIYEYMPNKSLDVFIFDPSKSKLLDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDQELNPKISDFGMARIFGGNEDQANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRKNTSFYDDEHALSLLGFVWIQWNEGNILSLIDPGMYDPNHHKDILRCIHIGLLCVQEHAIERPTMSAVISMLNSEVAFLPPPSQPAFIQRQTMLNSVSSKERYSSSSVNSVSITNVSGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01292 840 Gene3D - 22 146 IPR036426 -
Cca07g01292 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 178 IPR036426 -
Cca07g01292 840 Pfam PAN-like domain 349 407 IPR003609 -
Cca07g01292 840 ProSiteProfiles PAN/Apple domain profile. 337 422 IPR003609 -
Cca07g01292 840 CDD PAN_AP_plant 346 422 - -
Cca07g01292 840 CDD B_lectin 33 148 IPR001480 -
Cca07g01292 840 ProSiteProfiles Protein kinase domain profile. 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01292 840 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 22 837 - -
Cca07g01292 840 Gene3D Transferase(Phosphotransferase) domain 1 598 798 - -
Cca07g01292 840 PIRSF SRK 3 840 IPR024171 GO:0004674
Cca07g01292 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Cca07g01292 840 CDD STKc_IRAK 528 794 - -
Cca07g01292 840 Gene3D Phosphorylase Kinase; domain 1 487 597 - -
Cca07g01292 840 SMART ntp_6 349 421 IPR003609 -
Cca07g01292 840 SMART serkin_6 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01292 840 ProSiteProfiles Bulb-type lectin domain profile. 27 145 IPR001480 -
Cca07g01292 840 SUPERFAMILY Protein kinase-like (PK-like) 509 833 IPR011009 -
Cca07g01292 840 SMART blect_4 33 148 IPR001480 -
Cca07g01292 840 Pfam Protein tyrosine and serine/threonine kinase 523 793 IPR001245 GO:0004672|GO:0006468
Cca07g01292 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 837 - -
Cca07g01292 840 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Cca07g01292 840 Pfam D-mannose binding lectin 73 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01292 Cca-Chr7 33228469 33231826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01292 506 808 Receptor kinase-like Gene Family AT4G23230 59.736 1.22e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca07g01292 PK_Tyr_Ser-Thr 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01292 - - gmx:100779455 1295.8