Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01269 ATGAAATTTTTGGCACTTGCTTCTCACTACAATCACTGTACACTGGACGGTATAGCAATAAAAGATTTCGAGGTAAATTTAGCTGCACTAACACGTGGTGATAGCCTCATCATAGTGCCTAATGCAGATAGGGCACTTCTGAGAGCTCGAAACCCTCCAAAGATATCACATCCACATTTTGAGTATTCAAAATTCCCTCACACACACAACTTGTTCACCCTCCGAGGCAAAAGTGGCACCAATAATGTTACCGTGCCAGAAAATCAGATTCAAGTGCTTTATTTGTCGCCACAAAACATTGCTAGCTTAAAAACCAAGGCTCTGATGAAGGACAACACTTTGAGGGGCACCACAACTTTTCAGGTAGTGGCTGCAAAGATATGGAAGGCAAGAAGCATTGCAACATGTATGGAAGATGATAGAGTTTCCACAATGCTGTTTCCTGTGGATGTTAGGAAAAGGGTTGTTCCTCAACTCCCAGATGGCTTTGCAGGCAATGCATTGGTGCCTGGTTTTGCAAGAGCAACAGTGAGGGAGCTAAAGGAGCTAGAAGATGGTTGTCACATAAGGAAAGTGAAAGAAGGGATTGAAAGGTTGGATGATGAGTACATTAAGTCAGGTTTGGACTGGTTAGAGGAGAACAAAGGGGCACCATGCATGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGATTAGGGTTAGAGGAGCAACTTTTTGCATGGGGTAGACTAAAGTGTGCCACCCCACTTGCAGTTAAGCCTGGTTTGGTCATGATGTTGCCAGGGCCACAAGACCAAGGGGGTCTTAACATATGCTTGGATTTGCCTCCGGATCAAATGCAAGAGTTTTGTAGGATAATGCTAGAAATTTGA 873 0.441 MKFLALASHYNHCTLDGIAIKDFEVNLAALTRGDSLIIVPNADRALLRARNPPKISHPHFEYSKFPHTHNLFTLRGKSGTNNVTVPENQIQVLYLSPQNIASLKTKALMKDNTLRGTTTFQVVAAKIWKARSIATCMEDDRVSTMLFPVDVRKRVVPQLPDGFAGNALVPGFARATVRELKELEDGCHIRKVKEGIERLDDEYIKSGLDWLEENKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLAVKPGLVMMLPGPQDQGGLNICLDLPPDQMQEFCRIMLEI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01269 290 Gene3D - 2 64 IPR023213 -
Cca07g01269 290 Gene3D - 79 290 IPR023213 -
Cca07g01269 290 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 4 288 - -
Cca07g01269 290 Pfam Transferase family 9 283 - -
Cca07g01269 290 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01269 Cca-Chr7 32581316 32584471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01269 5 290 Monolignol Biosynthesis Gene Families AT5G48930 27.797 1.75e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01269 K15400 - gmx:100801822 483.026