Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01268 ATGGCTTCGCGACATCTGTGGGGCATTTTCGACATTTTGATCGATTGCATTGGGCATTTGAGTGTCTGTGAGTCCCAAAATTGTACTAATCCACCCAAGACAATTACGGTTAGCAAGTCAGGCAAAGCAGATTTTCAAACAATTCAAAGTGCCATTGACTCTGTTCAAGGACAAAACTCTCAGTGGATTCACATCCAAATTTCTGCTGGTGTTTATTCAGAACAGGTCTTAATTCCAATGAACAAACCATGCATTTATCTAGAAGGAGCTGGGTTTGGAGTGATGGGGATGGTGGGTGGGGTTTCAGTGTTTGTGTTTGTGGTGGCAGTAAAGGTTGTAGCTTTGCAGTTTGGGGTGAGTGGGGTTTCTGTTTTCTGCTATAGTATTTCAGAGCCAGGGCTCTACAGCAAGACTTTGAAGGAGATCGAGAAGGTTCCAGAAGACGAAGGGTACCGCAAGGCGGTGGAGAGCTTCACGAAGCACAGGCTCAGCGTCTGCCAGGAGGAGCAGGACTGGGAAGCCATCGAGACACGCCTCGGTTGCGGCCAGGTCGAGGAACTCATCGAAGAGGCTCAGGATGAACTCAAACTCATTTCCTACATGATCGGTATTTTTAcattatctatttaa 630 0.4619 MASRHLWGIFDILIDCIGHLSVCESQNCTNPPKTITVSKSGKADFQTIQSAIDSVQGQNSQWIHIQISAGVYSEQVLIPMNKPCIYLEGAGFGVMGMVGGVSVFVFVVAVKVVALQFGVSGVSVFCYSISEPGLYSKTLKEIEKVPEDEGYRKAVESFTKHRLSVCQEEQDWEAIETRLGCGQVEELIEEAQDELKLISYMIGIFTLSI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01268 209 Gene3D - 19 100 IPR012334 -
Cca07g01268 209 PANTHER BNAA02G10640D PROTEIN 133 202 - -
Cca07g01268 209 Pfam ETC complex I subunit conserved region 134 186 IPR006806 GO:0022904
Cca07g01268 209 SUPERFAMILY Pectin lyase-like 30 102 IPR011050 -
Cca07g01268 209 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT 133 202 IPR006806 GO:0022904
Cca07g01268 209 Pfam Pectinesterase 35 100 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01268 Cca-Chr7 32546557 32563638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01268 33 91 Carbohydrate Esterase AT2G19150 52.542 1.28e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01268 K03949 - gmx:100526984 133.265