Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01246 ATGTACGGCGGCGACAGCGACAGCGAGCACGAGCTCCGGCGCGGCGACGCCATGGACTTCCGGGACCTGAAGGTGGTATCCGCCGTGGGACGCGGGGCCAAGGGCGTGGTGTTCCTGGCGAGGCCGTACAGCGGCACGTGCGGGGAGTGGCTGGCGCTGAAGGTGGTGTCGAAGGCGCTGCTGCAGAAGAAGAATAAGAGCGACAGTGGGTGTAAGAGGGTGTCGTTTGAGAGGCACATACTGTGTCGTTTTGATCACCCGTTATTGCCCAAGTTCCGTGGGGCCTTTGAAACGGACCAACTCCTTGGATTCGCAATCGATTATTGCCACGGTGGGACTCTACATTCTCTTCGCAAAAAACAACCCCACAAGACTTTCTCTGAAGAAACCATAAGGTTTTACGCAGTTGAATTGGTCCTAGCATTGGAGTATTTGCACAATTTCGGAGTAGTGTACAGGGACTTGAAGCCAGAGAACATCATGATCCAAGAATCAGGTCATATAATGCTCGTGGATTTCGACCTCTCCAAGATGCTACACAAGTCAAACTCGTCGAGTTGCAACTCCTCACCCGGTTCAGACTCGTCCCCGGAGAAGGACCGAAGGAAGCGACGATTCTCGCGCTTCAACTGTTACTGTCACTCGGCGCAACTCATTCATGACTCAGAGATTCCGAGTCAGCTGATGCGTCGTCGGAGCGAGTCAGACTCGGTGGAAAAGTCAAACTCGTTCGTGGGAACCGAGGATTACGTGGCACCCGAGGTTATTTCAGGTGAAGGACACGATTTCGGAGTTGATTGGTGGTCGTTGGGCGTTGTTTTGTACGAGATGCTCTACGGGAAGACACCGTTTAAGGGTGCAAATAGGAAGGAAACGTTTCACCAAATTTTGACCAAGGAGCCTGAGTTGACAGGGGAAACGACACCGTTGAGGGACTTGATTAAGAAGTTGCTTACAAAAGATCCCAATCGTAGGATCGAGGTGGATGATATCAAGGGTCATGATTTCTTTAAATGTGTCAAGTGGGACACGATCTTGGAAATTGCGCGTCCACCCTATATACCTCAAAATGAAATTGTGGATTCTGAAGGGTTTTCAAGAAAAGATGTGGAGTCCTTTGTTCATGGGATATTTTTCCCCAAGAATAAAAAGCAAGGAGAGAAAAAGGAGAATGAGGGGCAGAAAGAGGACGATAAAAAGTGCGATAATAAGAATGTGTGGGTTGAGAAGTTGAACCAAAATTCTACCAAGGATGAAAATTTTTTAATCTTTTGA 1275 0.491 MYGGDSDSEHELRRGDAMDFRDLKVVSAVGRGAKGVVFLARPYSGTCGEWLALKVVSKALLQKKNKSDSGCKRVSFERHILCRFDHPLLPKFRGAFETDQLLGFAIDYCHGGTLHSLRKKQPHKTFSEETIRFYAVELVLALEYLHNFGVVYRDLKPENIMIQESGHIMLVDFDLSKMLHKSNSSSCNSSPGSDSSPEKDRRKRRFSRFNCYCHSAQLIHDSEIPSQLMRRRSESDSVEKSNSFVGTEDYVAPEVISGEGHDFGVDWWSLGVVLYEMLYGKTPFKGANRKETFHQILTKEPELTGETTPLRDLIKKLLTKDPNRRIEVDDIKGHDFFKCVKWDTILEIARPPYIPQNEIVDSEGFSRKDVESFVHGIFFPKNKKQGEKKENEGQKEDDKKCDNKNVWVEKLNQNSTKDENFLIF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01246 424 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 1 400 - -
Cca07g01246 424 Pfam Protein kinase domain 25 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01246 424 Pfam Protein kinase domain 239 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01246 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Cca07g01246 424 Gene3D Phosphorylase Kinase; domain 1 25 358 - -
Cca07g01246 424 ProSiteProfiles AGC-kinase C-terminal domain profile. 338 424 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca07g01246 424 MobiDBLite consensus disorder prediction 382 401 - -
Cca07g01246 424 Gene3D Transferase(Phosphotransferase) domain 1 113 356 - -
Cca07g01246 424 PANTHER FLIPPASE KINASE 1-RELATED 1 400 - -
Cca07g01246 424 SMART serkin_6 23 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01246 424 ProSiteProfiles Protein kinase domain profile. 23 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01246 424 SUPERFAMILY Protein kinase-like (PK-like) 22 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01246 Cca-Chr7 31637439 31640702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01246 9 424 AGC Kinase Gene Family AT3G25250 51.408 1.51e-143 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca07g01246 Pkinase 5.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01246 K20714 - gmx:100813693 623.239