Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01240 ATGAACAAGATCCCCTCGGGATTGAACCACTTAGTGAAAGAGGGCATGCCCTTGAATTCCAGTGTAGCAGAATTCTCAGCTGATCCTGGCTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGGAGGACCACCCAATTGGGGCTCAACACTAATGCTGAATTGGCTCAGAGATCTTCTCCATTGGTTGAAAATGGGAAGCTCCCTAGAGTCTCAAGTAGTCCATCATTGAAAGTGCCTGGATCAAACAAGAATTCTCCATTGCAAGACCTAATGGAAGTTGCCAATTCCCAAGAGGAATCCACAATCTCTGAACAAACTCCAAATGGGGACACTGGGGTGAAACCTTCCCCTTATATCAACTCTAGGAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACTTCAACCTCCACCAACCCTCCTACGGCTGCTGAAGCTAGTGAAGACTCAAATGCAAAGCGCAGCAAGCCTAATGAACGCGAGGGAAATGAGAATGGCCAAGTGTCTTTCCCTTTGCTTACCTTTTTATTTACCACAAAAATTACATTCCCCTTTTCACACCAAACCCACACCCCTCTCAAATTGATCACTCCATTCCACCCTCTAATGTAA 636 0.4528 MNKIPSGLNHLVKEGMPLNSSVAEFSADPGFAERAAKFSCFGSRSFNGRTTQLGLNTNAELAQRSSPLVENGKLPRVSSSPSLKVPGSNKNSPLQDLMEVANSQEESTISEQTPNGDTGVKPSPYINSRKRKGPSKGKAKETSTSTNPPTAAEASEDSNAKRSKPNEREGNENGQVSFPLLTFLFTTKITFPFSHQTHTPLKLITPFHPLM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01240 211 MobiDBLite consensus disorder prediction 139 156 - -
Cca07g01240 211 MobiDBLite consensus disorder prediction 72 122 - -
Cca07g01240 211 PANTHER - 15 176 - -
Cca07g01240 211 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 15 176 IPR024097 GO:0006355
Cca07g01240 211 MobiDBLite consensus disorder prediction 64 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01240 Cca-Chr7 31552446 31553176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01240 22 150 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 44.186 8.06e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01240 - - gmx:100812081 292.737