Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01228 ATGCAGTGTGTCATTGATGCAGTGTCCCAGAGCGTCAGAAAAGTAATTGCTTTGTGCAGAGTCATGAATGCTTTGTACCAGAGCGTCATAAAAGTTATTGCTTTGTGCAGGGTGTCATTGATGCAGGGTGTCATTGATGCAGTGTCCCAGAGCGTCAGAAAAGTAATTGCTTTGTGCAGAGTCATGAATGCTTTGTACCAGAGCGTCATAAAAGTTATTGCTTTGTGCAGGGTGTCATTGATGCAGGGTGTCATTGATGCAGTGTCCCAGAGCGTCAGAAAAGTAATTGCTTTGTGTAGAGTCATGAATGTTTTGTACCAGAGCGTCAGAAAATTTATTGCTTTGTGCAGGGTGTCATTGATGCAGGGTGTCATTGATGCAATTGCAATTAATTGTGTCATTGATGCAGTGTCCCAGAGCGTCAGAAAAGTAATTGCTTTGTGCAGAGTCATGAATGCTTTGTACCAGAGCGTCAGAAAATTTATTGCTTTGTGCAGGGTGTCATTGATGCAGGGCATACTTGGCTACATGCCTTTGGAGTATGTCATTGACGGTACGGTCACAGATAAATGGGATGTTTTCTCATTTGGTATGGCTCTACTGCAAGTTGTGTGTGGAATGCATTATTTAGTGATCTCAATGGAAAGGGAACTTCTGGAGAAGTCGGTTGAGGAGAATATTGATCTGAATATCAAAGGAAAGATTGCACCAGAGTGCTGGCGCGTCTTTGCGGATATCATGGTAAGATGCTTGGATTATGAACCAGCTGAGCGACCAACAATAGGTGAAGTAGAGGTGGAACTTGAGCATGTTCTGTCCTTGCAAGAACAAGCAGATATCACAAACACCCACACTGAATATACCTTATTGTCTAGAACCATTATTCCCCGGGCCTTTGGGATTGAAATGAAACTGTAA 918 0.4292 MQCVIDAVSQSVRKVIALCRVMNALYQSVIKVIALCRVSLMQGVIDAVSQSVRKVIALCRVMNALYQSVIKVIALCRVSLMQGVIDAVSQSVRKVIALCRVMNVLYQSVRKFIALCRVSLMQGVIDAIAINCVIDAVSQSVRKVIALCRVMNALYQSVRKFIALCRVSLMQGILGYMPLEYVIDGTVTDKWDVFSFGMALLQVVCGMHYLVISMERELLEKSVEENIDLNIKGKIAPECWRVFADIMVRCLDYEPAERPTIGEVEVELEHVLSLQEQADITNTHTEYTLLSRTIIPRAFGIEMKL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01228 305 Pfam Protein tyrosine and serine/threonine kinase 175 266 IPR001245 GO:0004672|GO:0006468
Cca07g01228 305 SUPERFAMILY Protein kinase-like (PK-like) 166 275 IPR011009 -
Cca07g01228 305 Gene3D Transferase(Phosphotransferase) domain 1 147 293 - -
Cca07g01228 305 PANTHER OS07G0166700 PROTEIN 165 291 IPR045272 GO:0004714|GO:0006468
Cca07g01228 305 PANTHER TYROSINE KINASE FAMILY PROTEIN 165 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01228 Cca-Chr7 31219085 31222001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01228 168 279 Receptor kinase-like Gene Family AT3G51550 33.333 9.30e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca07g01228 PK_Tyr_Ser-Thr 3.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01228 - - gmx:100305395 189.889