Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01193 ATGtcctacaccaatgCAAAAGAGTTGGCGAGATCGCTGGGACAGTTTTTGTTTGACACCACACCACACCATTCGGAAATTTCTGGCGATCTCTGCGTCTCTCCTATTTCTTCTGAATCTAACAACAACTCCCACAGAATGGCATCCAATAGGGGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAGGAGGCACAACGGATTGTGAATGCTGCAAAAAATGAAAAATTGGCTAGGTTGAAACATGCCAAGGAAGAGGCTGATAAGGAGATTGCTGAATACCGAGCTCAACTAGAGTACGAGTTTCAAAAGAAAGTGTCAGATAGTACTGGAGATTCTGGAGCTAATGTGAAGCGGCTTGAGCAAGAGACTGAAGCAAAAATCCATCACCTGAAAACTGAGGCTGCAAGAATATCAGATGATGTTGTCGCCATGCTCCTCAAATATTATTCTGGTGCGGTTAAGATTCTTGTTTTGGCTACAATGCTTTGTACCTTGCTGCGCTGTATTCAGAGAAATAACTTCAGATTTGTTAAAATAAACAGTTCAGAATTAAGAGATGTGAGTATTTGTGTTGCCGTTTTAACAAGTGCATGA 600 0.4117 MSYTNAKELARSLGQFLFDTTPHHSEISGDLCVSPISSESNNNSHRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKHAKEEADKEIAEYRAQLEYEFQKKVSDSTGDSGANVKRLEQETEAKIHHLKTEAARISDDVVAMLLKYYSGAVKILVLATMLCTLLRCIQRNNFRFVKINSSELRDVSICVAVLTSA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01193 199 Gene3D - 46 155 - -
Cca07g01193 199 Coils Coil 56 105 - -
Cca07g01193 199 MobiDBLite consensus disorder prediction 31 50 - -
Cca07g01193 199 Pfam Vacuolar (H+)-ATPase G subunit 53 150 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cca07g01193 199 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 52 149 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cca07g01193 199 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 47 151 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cca07g01193 199 MobiDBLite consensus disorder prediction 30 50 - -
Cca07g01193 199 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 47 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01193 Cca-Chr7 29818606 29824877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01193 47 152 Primary Pumps ATPases(2) AT3G01390 70.755 2.77e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01193 K02152 - gmx:100306550 186.422