Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01192 ATGTTCCTCTTTATCCTTGTTAGGTTCCTCAGTTTTACAACTACTCAGGCACAGTATGACTCCACCCCTGTCTATATATACCATAATTGCTCCGGGGGCAACAGTACCGATGGCAGCGCCTTCCAATCCAACCTCAAAACCCTCCTATCTTCCTTATCATCTAACTCCCTCAGCAACACCGGATTCAACAACACCACAGTCCGTGGAGAAAACCCCTCGGACTCGGTCTTTGGACTGTTCATGTGTAGAGGTGATGTCTCTCCTCAGCTTTGTCAACAGTGCGTCCAAAATGCAACCCATCGACTATCCACAGAGTGCTCCTTATCCAAACAAGCTGTCATTTGGTACGACGAGTGCACTCTTCGTTATTCCAACCGCTCGTTCTTCTCCACCGCCGACACGAGGCCTAGAGTTGGCGTGTTGGACATTACCAATGTCTCAAACCAAGAAAGCTTCATGCGTTTGTTGTTTGACACCATAAACACAACTGCAGATGAAGCAGCTCGTGGTAATCGTGAGGGGAATAAGTATGCCACAAAGCAAACAAACATAACTGAACTTCAGAGCCTTTATTGTCAAGCTCAGTGCACTCCAGACCTGTCACTCCAAGATTGCAGAGGATGTTTGAGTGGAGCGATAGGGGACCTTCCATGGTGCTGTCAAGGGAAGCAAGGAGGGAGGGTTCTATATCCCAGCTGTAATGTCAGGTATGGAGTGTACCCCTTCTATCTTTCCACACCAGCACGGGTTCCCGCAGATTCAGGATTTTCAGATGAAGATCCAACTTATCTATACCACAATTGCACAACTAACACAACTTCTGACAGCGCTTACAAAAAGCATCTCAAGACCCTCCTCTTTTACTTGTCTTCCAATGCTACCCATGGCAATAAATTTTATAAGATAGGTGTGGAGAACACTGTGTTTGGTCTCTTCATGTGCCGCGGTGACCTTTCCTCTCGCCTCTGTGAACAATGCGTCCTCAATGCAACCCAAAAAATATCGCTGGAGTGTAATTCGTTTCAAGAGGCTATAATTTGGTACAACCATTGCATGCTTCGCTATTCCTATCGCTACTTCTTCTCCCAACTCCAAACAAGTCCAACTTTTCAAATGTTGAGTATTATTGCTACCTCCTCCAGCCTCGTCCCGAATCAAGAGTTCCTCAGTTTCACATTATCAACTATGGATTTGTCTAGCGATGATTGCGCAAGCTGTCTGCAAGATATACGTAGACAAATCCCATGGACTCGCTTGGGAAGCGCAGAGGGAAGAGTTCTATATCCGTGTTGCAATATCAGGTTTGAATTTTTCCAATTTTACAGGGTAGGTGATGTAGCTCAATCGCCATCACCAGGTAATCCTTCTCCACCGGCCTTTAAAGAAAAAAGAAAAGGCCAATTGCGAAGAATGTTCGTGATTATTGTACCCACGATTGTCTCGGTGACACTTTTCTTTCTAGGCTATTATTTAGTAAAGCGAAAAGCGAAAAAGAGCGTTAAGACTATTCTTAAAGAAAATTTTGGTCCTGAGAGTGTTACTTTAGAGCCATTGCAATTCGATTTTGCGGATTGGAAAGGCGGATTTGGAGTAGTTTACAAGGGCATTCTTCTTGATGGACGACAAGTAGCAATAAAGAGACTTTCAACAAGTTCTAAACAAGGAGCAAATGAGTTCAAGAATGAAGTTTTATTGATAGTTAAGCTTCAACATCGAAATCTTGTTGCATTCATCGGCTTTTGTCTTGAAGAAAGGGATAAAATACTTATTTACGAATATGTGCCGAACAAGAGCCTTGACTATTTTTTATTTGGTTTGACACTTTATGAACGTTACAATATTATAGGAGGGATTGCTCGAGGAATTCTATATTTACATGAACATTCCCGACTCAAAGTCATACATCGTGATCTTAAACCAAGTAATGTTTTATTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTCTGGCAAGAATTGTTGAAATAAACCAAGACCAAGGGAGTACAAATAGAATTGTTGGAACATTTGGTTATATGTCTCCAGAGTATGTAATGCTTGGACAATTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTGATGGTTTTAGAGATTATTACCGGGAAAAAAAATTTAGGTTCTTATGACCTTCATCATGTTGTTGATGGCCTCTTGAGTTATGTTTGGAGGCAGTGGAGTGATCAAACACCGTTAAGTATATTAGATCCAAGAATTAAAGAAAATTATTCTGAAATTGAAGTTATTAAATGGATTCAAATTGGCTTATTATGTGTTCAGCAAAATCCCAATGATAGACCAACTATGaTCACGCCCAACGCAATATCAGTAACCAAAACTACAAGGCACACGTCTGATAGTGCGCCCAGCATGGTTCTCCCCACGCCTGGTGTGATTCACCTAAGGATTCCCATTCCAAATAGCGCCGACGTGACTAGCCTCGCGCCCGGCGTGATTTGA 2484 0.4191 MFLFILVRFLSFTTTQAQYDSTPVYIYHNCSGGNSTDGSAFQSNLKTLLSSLSSNSLSNTGFNNTTVRGENPSDSVFGLFMCRGDVSPQLCQQCVQNATHRLSTECSLSKQAVIWYDECTLRYSNRSFFSTADTRPRVGVLDITNVSNQESFMRLLFDTINTTADEAARGNREGNKYATKQTNITELQSLYCQAQCTPDLSLQDCRGCLSGAIGDLPWCCQGKQGGRVLYPSCNVRYGVYPFYLSTPARVPADSGFSDEDPTYLYHNCTTNTTSDSAYKKHLKTLLFYLSSNATHGNKFYKIGVENTVFGLFMCRGDLSSRLCEQCVLNATQKISLECNSFQEAIIWYNHCMLRYSYRYFFSQLQTSPTFQMLSIIATSSSLVPNQEFLSFTLSTMDLSSDDCASCLQDIRRQIPWTRLGSAEGRVLYPCCNIRFEFFQFYRVGDVAQSPSPGNPSPPAFKEKRKGQLRRMFVIIVPTIVSVTLFFLGYYLVKRKAKKSVKTILKENFGPESVTLEPLQFDFADWKGGFGVVYKGILLDGRQVAIKRLSTSSKQGANEFKNEVLLIVKLQHRNLVAFIGFCLEERDKILIYEYVPNKSLDYFLFGLTLYERYNIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMIPKISDFGLARIVEINQDQGSTNRIVGTFGYMSPEYVMLGQFSEKSDVFSFGVMVLEIITGKKNLGSYDLHHVVDGLLSYVWRQWSDQTPLSILDPRIKENYSEIEVIKWIQIGLLCVQQNPNDRPTMITPNAISVTKTTRHTSDSAPSMVLPTPGVIHLRIPIPNSADVTSLAPGVI 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01192 827 ProSiteProfiles Gnk2-homologous domain profile. 260 360 IPR002902 -
Cca07g01192 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 254 375 - -
Cca07g01192 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 460 779 - -
Cca07g01192 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 247 - -
Cca07g01192 827 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Cca07g01192 827 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Cca07g01192 827 Pfam Salt stress response/antifungal 268 356 IPR002902 -
Cca07g01192 827 ProSiteProfiles Protein kinase domain profile. 518 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01192 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 460 779 - -
Cca07g01192 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 254 375 - -
Cca07g01192 827 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Cca07g01192 827 ProSiteProfiles Gnk2-homologous domain profile. 23 128 IPR002902 -
Cca07g01192 827 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 247 - -
Cca07g01192 827 Pfam Protein kinase domain 526 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01192 827 SMART serkin_6 526 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01192 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Cca07g01192 827 CDD STKc_IRAK 526 777 - -
Cca07g01192 827 Gene3D Phosphorylase Kinase; domain 1 526 594 - -
Cca07g01192 827 SUPERFAMILY Protein kinase-like (PK-like) 526 778 IPR011009 -
Cca07g01192 827 Gene3D - 260 360 IPR038408 -
Cca07g01192 827 Gene3D - 22 128 IPR038408 -
Cca07g01192 827 Gene3D - 362 440 IPR038408 -
Cca07g01192 827 Gene3D - 139 242 IPR038408 -
Cca07g01192 827 Gene3D Transferase(Phosphotransferase) domain 1 595 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01192 Cca-Chr7 29719531 29729158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01192 260 786 Receptor kinase-like Gene Family AT4G05200 41.459 1.54e-136 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca07g01192 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01192 - - gmx:100798426 1102.43