Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01173 ATGGGTTTCTATACTGTGCTACTTGAGAGAAATGAAGAACTGATCAGTGTTGCAACTGTTAGGGTCTATGGGAAGAAGGTAGTAGAAGTACCTCTTGTTGGTACCAGATTACAATATCGTCGACATGGAATGTGCCATATCTTAATTAATGAGCTTGAAAAGAGTCACAACCAAAATGTGATAAAAGATAACACTTTATATGGAGGTGCATACTATGGCTCTCACGTGATGCAGTACGATGATgtctga 249 0.3775 MGFYTVLLERNEELISVATVRVYGKKVVEVPLVGTRLQYRRHGMCHILINELEKSHNQNVIKDNTLYGGAYYGSHVMQYDDV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01173 82 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 3 56 - -
Cca07g01173 82 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 3 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01173 Cca-Chr7 28760894 28766023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01173 2 54 PHD Transcription Factor Family AT5G58610 73.585 1.44e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01173 - - aprc:113857662 102.834