Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01164 ATGAAGGGTGTGAATGCATCAAAAATAGTAAGTCTTGAAAAGTTGAAACACTTTTACAGGCATGGTGTGAGGGAACCAAGAGACCCTTGGTCAGATGGACCTGAGAACATAACACAATGCCCAATTCCACCTGGAACAAGTTTCACCCAGAAGGTGGCCTTTACATTGGAAGAAGGAACTCTTTGGTGGCATGCACACAGCAGTTGGACTCGTGCCACTGTCCATGGTGCCATTCTCATTTTACCTGCCAATGGAACTTCATATCCTTTCCCTGAACCTTATGGACAAGAAATTCTTATCATTGGAGAGTGGTATAAGGGAGATGTGATGCAGATCATCAATTCAGCCCTGGCAAATGGTGGCGAGCCCAATGCATCAGATGCTTACACCATCAATGGCCAACCTGGTGACTTGAACTCTTTGAAGGTTATTACTTCTGTCAGGCACAAAGAGGGGATCACATTAATGCCTGAACTTTCCAACAGATTTGATCAATTCATTTTTGAAAATGCAGCTATTTGTTGGGATCAGTGGTTTCCTGAGGCATCCCGGGCAATGGTGCTTCAAGGTGCTGAAATTCTATTTTATCCTCAGGATGGAAGCATTGACTCTCGTGACCATTGGAAACGAGTAATGCAAGGACATGCTGGGGCCAATTTGGTACCTGTTGTGGCTTCAAATAGGATAGGAAAGGAGATAATTGAGACTGAGCATGGAAAAAACTCTCGACCCATCGCTCGACACCGCGCAATTAGAGAGACTCTCTTTTGGAGCTTTCCATGTCTAAAGAGCAGCACAGATGGTAAAGTGCCTTTGATATCTCAGTCAGGGGTGCATCACTTACATATATTTATATTCGTGCTAGTTGTTTTTCACATTTTCTACAACGTCATGACTATGGTGCTAGCCCGAGCAAAAaaatga 924 0.4372 MKGVNASKIVSLEKLKHFYRHGVREPRDPWSDGPENITQCPIPPGTSFTQKVAFTLEEGTLWWHAHSSWTRATVHGAILILPANGTSYPFPEPYGQEILIIGEWYKGDVMQIINSALANGGEPNASDAYTINGQPGDLNSLKVITSVRHKEGITLMPELSNRFDQFIFENAAICWDQWFPEASRAMVLQGAEILFYPQDGSIDSRDHWKRVMQGHAGANLVPVVASNRIGKEIIETEHGKNSRPIARHRAIRETLFWSFPCLKSSTDGKVPLISQSGVHHLHIFIFVLVVFHIFYNVMTMVLARAKK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01164 307 PANTHER MULTI-COPPER OXIDASE 20 140 IPR045087 -
Cca07g01164 307 Pfam Mlo family 262 306 IPR004326 GO:0006952|GO:0016021
Cca07g01164 307 Pfam Carbon-nitrogen hydrolase 171 231 IPR003010 GO:0006807
Cca07g01164 307 Pfam Multicopper oxidase 21 83 IPR011707 GO:0005507
Cca07g01164 307 PANTHER LACCASE-9-RELATED 20 140 - -
Cca07g01164 307 Gene3D - 170 254 IPR036526 -
Cca07g01164 307 Gene3D - 11 154 IPR008972 -
Cca07g01164 307 SUPERFAMILY Carbon-nitrogen hydrolase 171 232 IPR036526 -
Cca07g01164 307 SUPERFAMILY Cupredoxins 18 111 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01164 Cca-Chr7 28517081 28521120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01164 263 306 MLO family AT2G39200 52.273 1.80e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01164 K05909 - ccaj:109803342 296.589