Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01158 ATGGATGGACCCTTGGGTCAAGCCCAGCTTAATAAAGGGTTGGAATCTGTTCTGATTACTTTGGAAGATGTGGTTAATGGTGCCCCCAAAGCACCAGAGTTTCTTGGCTGTGTTATTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAAAGAGATTGGGCGGTTAATACATGAGGGTGGAGAGGAACCGGGCAGCCTCTTTGAAGTTGGACTAGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGTATAAGGGTGATGCTGTTTTGAGTGAGATCTGTGCAAGCTCCAACTTGTGGTTGGAGGCCTTCCAGCCACTGAAACCTCTTACATCAAGGAAATTAGAGAAATTTATTTAG 369 0.4444 MDGPLGQAQLNKGLESVLITLEDVVNGAPKAPEFLGCVIAKAITEHVVSLKEIGRLIHEGGEEPGSLFEVGLAADVLGSTLEVIKMYKGDAVLSEICASSNLWLEAFQPLKPLTSRKLEKFI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01158 122 ProSiteProfiles MI domain profile. 1 58 IPR003891 -
Cca07g01158 122 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 5 122 IPR045208 GO:0003743
Cca07g01158 122 SUPERFAMILY ARM repeat 4 113 IPR016024 -
Cca07g01158 122 Gene3D - 2 122 - -
Cca07g01158 122 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 5 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01158 Cca-Chr7 28365073 28365603 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01158 2 121 Eukaryotic Initiation Factors Gene Family AT3G60240 60.833 4.96e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01158 K03260 - gmx:100790680 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01505 01 32222702 32232358 Cca07g01158 07 28365073 28365603 PCT