Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01156 ATGTCTATTTCTATCACATTGGATTCTAAAAATGTTTCTTTAAATAGAAATGATACTGTAGTTAGTGATGAAGTTGTTTCTACAAATTCTGGCACATCAGATCAGCAGTCTGTTGATCTCCTAGTAACAACGTGCAAGGATAGTTCAGAGAATGCTGGAAGTGGTTCAGTGTCTCTTCCAGCATCAGGTATCAAGAACAAACCAGTTTCAGAGTCCAGTAAGGTGAAAACTTCATCAAAGGGGAAAAAGAAACGAAAAGAGATTCTTCAGAAGGTTGATGCTGCTGGGTCAACATCTAATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAAACTGCTGTAAGTTTAGAGAAAACAGAACTTGATGGAAAAGAAAGTGCTTCTACTTCTGGAAATTTAGAGCAGATGCCACTGATGCGGCTGAGCCAGATGCTGGAGCAGGTGAGAAAAATAAGCAGAGTAAAGCTGAACTTGTTGATTGGGAGGATGCTGCTGACATGTCTACTCCAAAAGCAATGTACTGATCTTCCTGAAGGGTTTGAAATCACGGCAGACATAGCTGAGGTTTTGATGAGTGCTAATGTTAATTCTCATGTAATTGAATGTGATGTGATTCACATTCTTCTACTGGAAGAAGACATATGA 651 0.3902 MSISITLDSKNVSLNRNDTVVSDEVVSTNSGTSDQQSVDLLVTTCKDSSENAGSGSVSLPASGIKNKPVSESSKVKTSSKGKKKRKEILQKVDAAGSTSNLYNAYKGPEEKKETAVSLEKTELDGKESASTSGNLEQMPLMRLSQMLEQVRKISRVKLNLLIGRMLLTCLLQKQCTDLPEGFEITADIAEVLMSANVNSHVIECDVIHILLLEEDI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01156 216 MobiDBLite consensus disorder prediction 47 87 - -
Cca07g01156 216 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 27 194 IPR045208 GO:0003743
Cca07g01156 216 MobiDBLite consensus disorder prediction 47 75 - -
Cca07g01156 216 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 27 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01156 Cca-Chr7 28362378 28363115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01156 69 115 Eukaryotic Initiation Factors Gene Family AT3G60240 68.085 2.38e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01156 K03260 - gmx:100796636 214.927